RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CERCAMQ5T4B2 595 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 TMPRSS9Q7Z410 1059 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 PHLDB2Q86SQ0 1253 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 ZNF354CQ86Y25 554 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 CCDC185Q8N715 623 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 MSANTD4Q8NCY6 345 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 OR6C4Q8NGE1 309 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 HTR3CQ8WXA8 447 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 RXFP2Q8WXD0 754 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 EXOC2Q96KP1 924 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 RBM15Q96T37 977 aaKnown RBP eCLIP14.83□□□□□ -0.044e-6■■■□□ 19
TRAF4-212ENST00000498540 RETREG1Q9H6L5 497 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 SEPT10Q9P0V9 454 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 MFHAS1Q9Y4C4 1052 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 DOPEY2Q9Y3R5 2298 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 FLNCQ14315 2725 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 ZSCAN5CA6NGD5 496 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-212ENST00000498540 C9orf172C9J069 976 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 PCCBP05166 539 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 PLEKP08567 350 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-212ENST00000498540 XPAP23025 273 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-212ENST00000498540 MAPK10P53779 464 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 ELP6Q0PNE2 266 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 MAN2A1Q16706 1144 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 MIIPQ5JXC2 388 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 COLEC12Q5KU26 742 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 SPRED1Q7Z699 444 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 SLITRK4Q8IW52 837 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 JOSD2Q8TAC2 188 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 GPT2Q8TD30 523 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 EPS8L1Q8TE68 723 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 USP7Q93009 1102 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 WDR92Q96MX6 357 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 PCDH12Q9NPG4 1184 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 LHX3Q9UBR4 397 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 APPL1Q9UKG1 709 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 RNF215Q9Y6U7 377 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 SDK2Q58EX2 2172 aa14.82□□□□□ -0.04
TRAF4-212ENST00000498540 PRKCGP05129 697 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 GLB1P16278 677 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 SDC4P31431 198 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 LIG3P49916 1009 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 HDAC4P56524 1084 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 CLCA4Q14CN2 919 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 UGP2Q16851 508 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 KLHDC7AQ5VTJ3 777 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 DTX1Q86Y01 620 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 PYROXD2Q8N2H3 581 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 PLA2G15Q8NCC3 412 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 SLC20A1Q8WUM9 679 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 CASKIN2Q8WXE0 1202 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 OR1E3Q8WZA6 343 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 HMCESQ96FZ2 354 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 SEMA3CQ99985 751 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 NCAPGQ9BPX3 1015 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 FUCA2Q9BTY2 467 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 NAA15Q9BXJ9 866 aaKnown RBP14.81□□□□□ -0.04
TRAF4-212ENST00000498540 NDST4Q9H3R1 872 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 SEMA6CQ9H3T2 930 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 FGF22Q9HCT0 170 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 MRPL40Q9NQ50 206 aaKnown RBP14.81□□□□□ -0.04
TRAF4-212ENST00000498540 DGKBQ9Y6T7 804 aa14.81□□□□□ -0.04
TRAF4-212ENST00000498540 ARHGEF17Q96PE2 2063 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-212ENST00000498540 TSPAN11A1L157 253 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 TMEM202A6NGA9 273 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 C2CD4BA6NLJ0 364 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 B4DGG1 531 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 TNFP01375 233 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 MMP12P39900 470 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 PTPN9P43378 593 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 SUOXP51687 545 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 MTM1Q13496 603 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 HLTFQ14527 1009 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAF4-212ENST00000498540 C16orf72Q14CZ0 275 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 AGERQ15109 404 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 CYTH1Q15438 398 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 C14orf28Q4W4Y0 310 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 VWA3BQ502W6 1294 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 INO80DQ53TQ3 878 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-212ENST00000498540 PHF19Q5T6S3 580 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 OGFOD3Q6PK18 319 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 STRADAQ7RTN6 431 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 TAF8Q7Z7C8 310 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 ZSWIM9Q86XI8 627 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 RTL3Q8N8U3 475 aaKnown RBP14.8□□□□□ -0.04
TRAF4-212ENST00000498540 ZSCAN1Q8NBB4 408 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 FAM46DQ8NEK8 389 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 ATL2Q8NHH9 583 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 FAM172AQ8WUF8 416 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 TMEM159Q96B96 161 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 CMKLR1Q99788 373 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 KIAA1468Q9P260 1216 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 LRIT1Q9P2V4 623 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 DAAM1Q9Y4D1 1078 aa14.8□□□□□ -0.04
TRAF4-212ENST00000498540 A0A1W2PQC6 194 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 RASA4BC9J798 803 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 F8VZ95 297 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 RASA4O43374 803 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 ZFC3H1O60293 1989 aaKnown RBP14.79□□□□□ -0.04
TRAF4-212ENST00000498540 PPFIA2O75334 1257 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms