RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 LILRB1Q8NHL6 650 aaPredicted RBP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 RFWD2Q8NHY2 731 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 HES6Q96HZ4 224 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ADGRG7Q96K78 797 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ARPC5LQ9BPX5 153 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 REEP2Q9BRK0 252 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 HERPUD2Q9BSE4 406 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ITM2CQ9NQX7 267 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 OR6C3Q9NZP0 311 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 PCDHGB5Q9Y5G0 923 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 PBRM1Q86U86 1689 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 ADGBQ8N7X0 1667 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 TARBP1Q13395 1621 aaKnown RBP4.32□□□□□ -1.72
TRIM4-205ENST00000496896 WDR62O43379 1518 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 EPRSP07814 1512 aaKnown RBP4.32□□□□□ -1.72
TRIM4-205ENST00000496896 ZMYM4Q5VZL5 1548 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 MAGEA13PA6NCF6 341 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 PER2O15055 1255 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 KLK10O43240 276 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 SLC25A17O43808 307 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 CEP104O60308 925 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 NBNO60934 754 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 PCNAP12004 261 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 GPTP24298 496 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 CHATP28329 748 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 MYBPHQ13203 477 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 SNTA1Q13424 505 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 EDRF1Q3B7T1 1238 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 ZNF672Q499Z4 452 aaPredicted RBP4.32□□□□□ -1.72
TRIM4-205ENST00000496896 XKR9Q5GH70 373 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 NR2C2APQ86WQ0 139 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 BICD1Q96G01 975 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 ZNF385AQ96PM9 386 aaKnown RBP4.32□□□□□ -1.72
TRIM4-205ENST00000496896 SIN3AQ96ST3 1273 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 ALKBH4Q9NXW9 302 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 PCDHGB3Q9Y5G1 929 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
TRIM4-205ENST00000496896 ADAMTS12P58397 1594 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 URB2Q14146 1524 aaKnown RBP4.31□□□□□ -1.72
TRIM4-205ENST00000496896 ARHGEF12Q9NZN5 1544 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 DOCK7Q96N67 2140 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 RAD54L2Q9Y4B4 1467 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 PTPRKQ15262 1439 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 INSRP06213 1382 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 A0A0U1RQF3 1178 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 J3KR12 359 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 NDUFB4O95168 129 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 TFPIP10646 304 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 CD72P21854 359 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 CXCR3P49682 368 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 NR1H2P55055 460 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 DLG1Q12959 904 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 PPFIA1Q13136 1202 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 PPP6R3Q5H9R7 873 aaPredicted RBP4.31□□□□□ -1.72
TRIM4-205ENST00000496896 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.31□□□□□ -1.72
TRIM4-205ENST00000496896 TBC1D26Q86UD7 250 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 ZBTB8BQ8NAP8 495 aaPredicted RBP4.31□□□□□ -1.72
TRIM4-205ENST00000496896 SLITRK1Q96PX8 696 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 CYSLTR2Q9NS75 346 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 KIF14Q15058 1648 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 ADCY10Q96PN6 1610 aa4.31□□□□□ -1.72
TRIM4-205ENST00000496896 ADGRL2O95490 1459 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 TEX14Q8IWB6 1497 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 SPATA31E1Q6ZUB1 1445 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 CCDC7Q96M83 1385 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 ANKRD30BQ9BXX2 1392 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 IFRD1O00458 451 aaPredicted RBP4.3□□□□□ -1.72
TRIM4-205ENST00000496896 GUCY1B2O75343 617 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 ZNF432O94892 652 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 IGKV3-20P01619 116 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 CD58P19256 250 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 DLX5P56178 289 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 DHX34Q14147 1143 aaKnown RBP4.3□□□□□ -1.72
TRIM4-205ENST00000496896 NAA25Q14CX7 972 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.72
TRIM4-205ENST00000496896 CALCRLQ16602 461 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 ZNF718Q3SXZ3 478 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 SETMARQ53H47 684 aaPredicted RBP4.3□□□□□ -1.72
TRIM4-205ENST00000496896 NAA35Q5VZE5 725 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 LDHAL6AQ6ZMR3 332 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 SHFQ7M4L6 423 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 NAGSQ8N159 534 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 PGBD5Q8N414 524 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 TNIP2Q8NFZ5 429 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 NOC3LQ8WTT2 800 aaKnown RBP4.3□□□□□ -1.72
TRIM4-205ENST00000496896 HERVK_113Q902F9 699 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 SCMH1Q96GD3 660 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 MROH8Q9H579 483 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 RETREG1Q9H6L5 497 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 MBD5Q9P267 1494 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 SHANK2Q9UPX8 1470 aa4.3□□□□□ -1.72
TRIM4-205ENST00000496896 DAPK1P53355 1430 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 SMG6Q86US8 1419 aaKnown RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 CROCC2H7BZ55 1655 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 TYW5A2RUC4 315 aaKnown RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 PABPN1LA6NDY0 278 aaKnown RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 KLRF2D3W0D1 207 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 HSPA12AO43301 675 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms