RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PAK5Q9P286 719 aa15.94■□□□□ 0.14
TRA2A-208ENST00000490942 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.94■□□□□ 0.14
TRA2A-208ENST00000490942 EML5Q05BV3 1969 aa15.94■□□□□ 0.14
TRA2A-208ENST00000490942 LOC285095A0A1B0GVY8 99 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 TTC24A2A3L6 582 aaPredicted RBP15.93■□□□□ 0.14
TRA2A-208ENST00000490942 PSMD3O43242 534 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 RNGTTO60942 597 aaKnown RBP15.93■□□□□ 0.14
TRA2A-208ENST00000490942 PRLP01236 227 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 CYP2A6P11509 494 aaPredicted RBP15.93■□□□□ 0.14
TRA2A-208ENST00000490942 FDFT1P37268 417 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 MMP12P39900 470 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 TNNT3P45378 269 aaPredicted RBP15.93■□□□□ 0.14
TRA2A-208ENST00000490942 SRSF5Q13243 272 aaKnown RBP15.93■□□□□ 0.14
TRA2A-208ENST00000490942 SNX1Q13596 522 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 PEAR1Q5VY43 1037 aaPredicted RBP15.93■□□□□ 0.14
TRA2A-208ENST00000490942 CCDC70Q6NSX1 233 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 KDELC1Q6UW63 502 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 USP45Q70EL2 814 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 DPPA4Q7L190 304 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 HORMAD1Q86X24 394 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 ZSWIM9Q86XI8 627 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 PAF1Q8N7H5 531 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 SUMF1Q8NBK3 374 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 RBM15Q96T37 977 aaKnown RBP eCLIP15.93■□□□□ 0.143e-8■■■■□ 21.8
TRA2A-208ENST00000490942 AP1M1Q9BXS5 423 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 KCTD5Q9NXV2 234 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 DMTF1Q9Y222 760 aa15.93■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3DA0A087WVF3 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3IA0A087WXS9 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3EA0A087X179 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3KA0A087X1G2 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 A0A0J9YYE9 177 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3FA6NER0 549 aaPredicted RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 ANKRD66B4E2M5 251 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3LB9A6J9 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 PSMD11O00231 422 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 PLK4O00444 970 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 SPINT1O43278 529 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 NDST3O95803 873 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TRBC1P01850 177 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 IGHV4-34P06331 123 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3HP0C7X1 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 HLA-DPA1P20036 260 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 COILP38432 576 aaPredicted RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 WNT3AP56704 352 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 CREB5Q02930 508 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 AGERQ15109 404 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TMEM259Q4ZIN3 620 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 LYSMD4Q5XG99 296 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3GQ6DHY5 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3CQ6IPX1 549 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 CCDC137Q6PK04 289 aaKnown RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 RABEPKQ7Z6M1 372 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TBC1D3Q8IZP1 549 aaPredicted RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 SPATA22Q8NHS9 363 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 CCHCR1Q8TD31 782 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 PDCD6IPQ8WUM4 868 aaKnown RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 IFT43Q96FT9 208 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 OXNAD1Q96HP4 312 aaPredicted RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 C6orf106Q9H6K1 298 aaPredicted RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 PCDH12Q9NPG4 1184 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 PCYOX1Q9UHG3 505 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 SMG5Q9UPR3 1016 aaKnown RBP15.92■□□□□ 0.14
TRA2A-208ENST00000490942 INVSQ9Y283 1065 aa15.92■□□□□ 0.14
TRA2A-208ENST00000490942 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.91■□□□□ 0.14
TRA2A-208ENST00000490942 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 CAPN8A6NHC0 703 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 NEMP1O14524 444 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 EPN2O95208 641 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 GAS8O95995 478 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 MT-CYBP00156 380 aaPredicted RBP15.91■□□□□ 0.14
TRA2A-208ENST00000490942 IFNB1P01574 187 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 LMNAP02545 664 aaKnown RBP15.91■□□□□ 0.14
TRA2A-208ENST00000490942 PDHA1P08559 390 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 ZNF30P17039 623 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 CD27P26842 260 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 PSMB4P28070 264 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 EPHB1P54762 984 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 SETMARQ53H47 684 aaPredicted RBP15.91■□□□□ 0.14
TRA2A-208ENST00000490942 KCTD11Q693B1 232 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 PRR23BQ6ZRT6 265 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 SYDE1Q6ZW31 735 aaPredicted RBP15.91■□□□□ 0.14
TRA2A-208ENST00000490942 GSTA5Q7RTV2 222 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 ZNF572Q7Z3I7 529 aaPredicted RBP15.91■□□□□ 0.14
TRA2A-208ENST00000490942 SLC41A1Q8IVJ1 513 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 TMEFF1Q8IYR6 380 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 KIF18AQ8NI77 898 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 FAM174AQ8TBP5 190 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 BIRC7Q96CA5 298 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 CAPZA3Q96KX2 299 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 MRGPRX2Q96LB1 330 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 HSPA12BQ96MM6 686 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 GORASP1Q9BQQ3 440 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 C1QTNF2Q9BXJ5 285 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 ARNT2Q9HBZ2 717 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 SUSD2Q9UGT4 822 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 CDC23Q9UJX2 597 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 CHKBQ9Y259 395 aa15.91■□□□□ 0.14
TRA2A-208ENST00000490942 SPAG17Q6Q759 2223 aa15.9■□□□□ 0.14
TRA2A-208ENST00000490942 A0A1W2PPC4 97 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms