RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RFPL1O75677 317 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 VAPBO95292 243 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 NFATC1O95644 943 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ASMTLO95671 621 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ADH1CP00326 375 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 MPOP05164 745 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 HOXB8P17481 243 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 POLR2EP19388 210 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TYK2P29597 1187 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 CRHR1P34998 444 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 RPA3P35244 121 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 NNMTP40261 264 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 RGRP47804 291 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 SERPINB4P48594 390 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 LIMK2P53671 638 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 EPHB1P54762 984 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 RPL26P61254 145 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 SNRPD1P62314 119 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 PRAMEP78395 509 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 PPARDQ03181 441 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 RAD51Q06609 339 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 BCL2L1Q07817 233 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 KCNC3Q14003 757 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 MPP2Q14168 576 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 GALNT3Q14435 633 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 CBX2Q14781 532 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 GRM3Q14832 879 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 LRRC14Q15048 493 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TAF1AQ15573 450 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 CNGA3Q16281 694 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 INSCQ1MX18 579 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 LY6G5CQ5SRR4 150 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ARMC12Q5T9G4 340 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 NEPROQ6NW34 567 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 LVRNQ6Q4G3 990 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TMEM184AQ6ZMB5 413 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 KIAA0408Q6ZU52 694 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 GPR149Q86SP6 731 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 CNTN4Q8IWV2 1026 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TRIM42Q8IWZ5 723 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TDHQ8IZJ6 230 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ADGRG2Q8IZP9 1017 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 AHI1Q8N157 1196 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 NDUFAF2Q8N183 169 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 RYBPQ8N488 228 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 OTUD6BQ8N6M0 293 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 PCDH20Q8N6Y1 951 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 EFHBQ8N7U6 833 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 GDAP1Q8TB36 358 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ITFG1Q8TB96 612 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 BPIFB1Q8TDL5 484 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TCP10LQ8TDR4 215 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 DENND1AQ8TEH3 1009 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 WFIKKN2Q8TEU8 576 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 OSCP1Q8WVF1 389 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 SMARCD2Q92925 531 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 E2F7Q96AV8 911 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ISG20Q96AZ6 181 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TIFAQ96CG3 184 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 SERAC1Q96JX3 654 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ZNF778Q96MU6 729 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 TSNARE1Q96NA8 513 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 KLF6Q99612 283 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 CEP44Q9C0F1 390 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 LINC00597Q9H2U6 94 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 RHOJQ9H4E5 214 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 ATP13A3Q9H7F0 1226 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 THG1LQ9NWX6 298 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 DUS2Q9NX74 493 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 OBP2AQ9NY56 170 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 DCDC2Q9UHG0 476 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 GRID1Q9ULK0 1009 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 RPL26L1Q9UNX3 145 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 SLC8A2Q9UPR5 921 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.27
SF3A3-206ENST00000487062 WNT6Q9Y6F9 365 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 KIF26AQ9ULI4 1882 aaPredicted RBP7.09□□□□□ -1.28
SF3A3-206ENST00000487062 A0A1W2PQ67 120 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ANKRD66B4E2M5 251 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 TPP1O14773 563 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 PFDN6O15212 129 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 LDB2O43679 373 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SOCS5O75159 536 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GJB3O75712 270 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 RPP40O75818 363 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GLP2RO95838 553 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 FAM107AO95990 144 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GSRP00390 522 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 MT-CO1P00395 513 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ASLP04424 464 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 GSTA1P08263 222 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 VIMP08670 466 aaKnown RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 ADH5P11766 374 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 NEFHP12036 1026 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SRCP12931 536 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 LPOP22079 712 aaPredicted RBP7.08□□□□□ -1.28
SF3A3-206ENST00000487062 VAMP1P23763 118 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 SERPINA4P29622 427 aa7.08□□□□□ -1.28
SF3A3-206ENST00000487062 HLA-FP30511 346 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms