RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SLCO3A1Q9UIG8 710 aa10.9□□□□□ -0.67
DDX56-212ENST00000485367 NOCTQ9UK39 431 aaKnown RBP10.9□□□□□ -0.67
DDX56-212ENST00000485367 STAP1Q9ULZ2 295 aa10.9□□□□□ -0.67
DDX56-212ENST00000485367 HS3ST4Q9Y661 456 aa10.9□□□□□ -0.67
DDX56-212ENST00000485367 CACNA1EQ15878 2313 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 TPRP12270 2363 aaKnown RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 A0A1B0GVM2 712 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 DPPA5A6NC42 116 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 TCAF2A6NFQ2 919 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 METTL12A8MUP2 240 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 SMIM24O75264 130 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 SRPRAP08240 638 aaKnown RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 ABHD2P08910 425 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 GZMAP12544 262 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 MZF1P28698 734 aaPredicted RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 CXCR3P49682 368 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 NOMO3P69849 1222 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 CDR2Q01850 454 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 ZBTB16Q05516 673 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 DEUP1Q05D60 604 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 MGAT5Q09328 741 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 ZNF177Q13360 481 aaPredicted RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 SLC12A1Q13621 1099 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 LAMB3Q13751 1172 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 PTK6Q13882 451 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 SIX1Q15475 284 aaPredicted RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 SH3PXD2AQ5TCZ1 1133 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 ZNF776Q68DI1 518 aaPredicted RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 CGB2Q6NT52 195 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 C14orf80Q86SX3 495 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 ZNF677Q86XU0 584 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 ZCCHC9Q8N567 271 aaKnown RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 MGARPQ8TDB4 240 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 DNASE2BQ8WZ79 361 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 RPL10LQ96L21 214 aaKnown RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 PLEKHG4BQ96PX9 1271 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 TBCBQ99426 244 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 TKTL2Q9H0I9 626 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 RSPH9Q9H1X1 276 aaPredicted RBP10.89□□□□□ -0.67
DDX56-212ENST00000485367 PPCSQ9HAB8 311 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 SAR1AQ9NR31 198 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.89□□□□□ -0.672e-10■□□□□ 9.7
DDX56-212ENST00000485367 SENP1Q9P0U3 644 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 LNPEPQ9UIQ6 1025 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 GGT7Q9UJ14 662 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 SNX10Q9Y5X0 201 aa10.89□□□□□ -0.67
DDX56-212ENST00000485367 PCDH15Q96QU1 1955 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 EDDM13A0A1B0GTR0 161 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FAM47DPA6NHR8 397 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 ARHGAP33O14559 1287 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 GIPC1O14908 333 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 PRPF4O43172 522 aaKnown RBP eCLIP10.88□□□□□ -0.67
DDX56-212ENST00000485367 RNASEH1O60930 286 aaKnown RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 F9P00740 461 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 SYPP08247 313 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 CHRNB2P17787 502 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 ACSL1P33121 698 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 SCNN1AP37088 669 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 STK19P49842 368 aaPredicted RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 OXCT1P55809 520 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 BRMS1LQ5PSV4 323 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 CXorf57Q6NSI4 855 aaKnown RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 PHLDB2Q86SQ0 1253 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 HDDC3Q8N4P3 179 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 MINDY1Q8N5J2 469 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 ANKRD42Q8N9B4 389 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 KDM1BQ8NB78 822 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FAM13CQ8NE31 585 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 OR2I1PQ8NGU4 316 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FAM81AQ8TBF8 368 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 TEKT4Q8WW24 435 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 DNAJC9Q8WXX5 260 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 SNX19Q92543 992 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 NT5C3BQ969T7 300 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 NUDCD1Q96RS6 583 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FAM167BQ9BTA0 163 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 CCDC28BQ9BUN5 200 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 MYLK2Q9H1R3 596 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 C6orf106Q9H6K1 298 aaPredicted RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 ANLNQ9NQW6 1124 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 ARHGEF38Q9NXL2 777 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 EIF2B4Q9UI10 523 aaKnown RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 NCKAP1Q9Y2A7 1128 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 LRCH1Q9Y2L9 728 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 A0A1B0GTW7 788 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 ZSCAN9O15535 394 aaPredicted RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 SEMA4FO95754 770 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 GAS8O95995 478 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 COMTP21964 271 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 NNMTP40261 264 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 PLK1P53350 603 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FMO1Q01740 532 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 OCRLQ01968 901 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 SULT2A1Q06520 285 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 DYNC1I2Q13409 638 aaKnown RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 CCDC25Q86WR0 208 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 MMAAQ8IVH4 418 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms