RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TRPM6Q9BX84 2022 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 SNPHO15079 494 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 INSIG1O15503 277 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 TMCC1O94876 653 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 LRIG2O94898 1065 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 TNFP01375 233 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 PLEKP08567 350 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 GLB1P16278 677 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 ETV5P41161 510 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 MTIF2P46199 727 aaKnown RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 MAPK10P53779 464 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 NRG1Q02297 640 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 RAPGEF1Q13905 1077 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 ARHGEF7Q14155 803 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 NFATC4Q14934 902 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 CDO1Q16878 200 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 C15orf59Q2T9L4 293 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 CCDC14Q49A88 953 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 MANEALQ5VSG8 457 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 NAA35Q5VZE5 725 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 KCTD16Q68DU8 428 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 DPY19L2P1Q6NXN4 242 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 OGFOD3Q6PK18 319 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 ZNF574Q6ZN55 896 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 TAF8Q7Z7C8 310 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 PHLDB2Q86SQ0 1253 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 SFTPA2Q8IWL1 248 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 GPR156Q8NFN8 814 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 HTR3CQ8WXA8 447 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 RXFP2Q8WXD0 754 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 JPH3Q8WXH2 748 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 HMCESQ96FZ2 354 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 WDR92Q96MX6 357 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 GDAP1L1Q96MZ0 367 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 RBM15Q96T37 977 aaKnown RBP eCLIP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 CMKLR1Q99788 373 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 TMUB1Q9BVT8 246 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 KLC2Q9H0B6 622 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 RETREG1Q9H6L5 497 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 METTL5Q9NRN9 209 aaKnown RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 TMEM248Q9NWD8 314 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 FOXJ2Q9P0K8 574 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 DKK3Q9UBP4 350 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 KLQ9UEF7 1012 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 RWDD2AQ9UIY3 292 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 APPL1Q9UKG1 709 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 MFHAS1Q9Y4C4 1052 aa7.45□□□□□ -1.22
CSDE1-206ENST00000483030 NYNRINQ9P2P1 1898 aaKnown RBP7.45□□□□□ -1.22
CSDE1-206ENST00000483030 RP1P56715 2156 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 A0A1W2PQC6 194 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 ZSCAN5CA6NGD5 496 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 C9orf172C9J069 976 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 B4GAT1O43505 415 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PPFIA2O75334 1257 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PIGNO95427 931 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 IGSF6O95976 241 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PCCBP05166 539 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 MMEP08473 750 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 SDC4P31431 198 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 LIG3P49916 1009 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 SUOXP51687 545 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 RHOAP61586 193 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 TLE1Q04724 770 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 ELP6Q0PNE2 266 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 CLCA4Q14CN2 919 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 CYTH1Q15438 398 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 UGP2Q16851 508 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 INO80DQ53TQ3 878 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 CERCAMQ5T4B2 595 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PHF19Q5T6S3 580 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 ARCQ7LC44 396 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 TMPRSS9Q7Z410 1059 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 SPRED1Q7Z699 444 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 NOP9Q86U38 636 aaKnown RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 DTX1Q86Y01 620 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PTRH1Q86Y79 214 aaKnown RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 CCDC185Q8N715 623 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PLA2G15Q8NCC3 412 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 MSANTD4Q8NCY6 345 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 ATL2Q8NHH9 583 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 GPT2Q8TD30 523 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 OR1E3Q8WZA6 343 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 TMEM159Q96B96 161 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 TBC1D31Q96DN5 1066 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PDXPQ96GD0 296 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 EXOC2Q96KP1 924 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 REPIN1Q9BWE0 567 aaKnown RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 SLC25A18Q9H1K4 315 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 SEMA6CQ9H3T2 930 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 DPEP2Q9H4A9 486 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 SUV39H2Q9H5I1 410 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 NOL6Q9H6R4 1146 aaKnown RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 RDH14Q9HBH5 336 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 PCDH12Q9NPG4 1184 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 MRPL40Q9NQ50 206 aaKnown RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 GEMIN8Q9NWZ8 242 aaKnown RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 LRIT1Q9P2V4 623 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 DAAM1Q9Y4D1 1078 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms