RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 RGL1Q9NZL6 768 aa1.27□□□□□ -2.21
CALD1-218ENST00000478075 MYO1AQ9UBC5 1043 aa1.27□□□□□ -2.21
CALD1-218ENST00000478075 KLK13Q9UKR3 277 aa1.27□□□□□ -2.21
CALD1-218ENST00000478075 RARRES3Q9UL19 164 aa1.27□□□□□ -2.21
CALD1-218ENST00000478075 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.27□□□□□ -2.21
CALD1-218ENST00000478075 DISP3Q9P2K9 1392 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 AKR1B15C9JRZ8 316 aaPredicted RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 SOCS6O14544 535 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 PLRG1O43660 514 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 ZIC3O60481 467 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 NDUFS7O75251 213 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 RPP40O75818 363 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 CAVIN2O95810 425 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 ANXA6P08133 673 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 HARSP12081 509 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 PEX2P28328 305 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 TMPOP42166 694 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 PCP4P48539 62 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 EFNA5P52803 228 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 RCAN1P53805 252 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 PIN1Q13526 163 aaPredicted RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 PMS2P11Q13670 270 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 ALKBH1Q13686 389 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 ENPP2Q13822 863 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 GXYLT1Q4G148 440 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 RNF144BQ7Z419 303 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 TRPT1Q86TN4 253 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 PPHLN1Q8NEY8 458 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 OR2L2Q8NH16 312 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 C2CD4CQ8TF44 421 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 SLC20A1Q8WUM9 679 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 ATOH1Q92858 354 aaPredicted RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 GDF15Q99988 308 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 TRIM31Q9BZY9 425 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 PDE11AQ9HCR9 933 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 WDR6Q9NNW5 1121 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 HOMER2Q9NSB8 354 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 ANAPC11Q9NYG5 84 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 NYAP2Q9P242 653 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 ASIC3Q9UHC3 531 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 ZNF180Q9UJW8 692 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 EXOGQ9Y2C4 368 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 MRPS28Q9Y2Q9 187 aaKnown RBP1.26□□□□□ -2.21
CALD1-218ENST00000478075 LOXL2Q9Y4K0 774 aa1.26□□□□□ -2.21
CALD1-218ENST00000478075 SLC38A8A6NNN8 435 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 PI15O43692 258 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 CCNT1O60563 726 aaKnown RBP1.25□□□□□ -2.21
CALD1-218ENST00000478075 LARGE1O95461 756 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 ZBED1O96006 694 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 U2AF1L5P0DN76 240 aaPredicted RBP1.25□□□□□ -2.21
CALD1-218ENST00000478075 STX2P32856 288 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 U2AF1Q01081 240 aaKnown RBP eCLIP1.25□□□□□ -2.21
CALD1-218ENST00000478075 CAPSQ13938 189 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 KIAA0753Q2KHM9 967 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 SIRPB2Q5JXA9 342 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 PAPPA-AS1Q5QFB9 102 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 DOK6Q6PKX4 331 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 CCDC149Q6ZUS6 474 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 GALNT7Q86SF2 657 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 WDR63Q8IWG1 891 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 SCN4BQ8IWT1 228 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 VPS52Q8N1B4 723 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 SCAIQ8N9R8 606 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 GLIS1Q8NBF1 620 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 FAM156AQ8NDB6 213 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 OTUD7AQ8TE49 926 aaPredicted RBP1.25□□□□□ -2.21
CALD1-218ENST00000478075 GRHL3Q8TE85 626 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 PHKBQ93100 1093 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 ABTB1Q969K4 478 aaPredicted RBP1.25□□□□□ -2.21
CALD1-218ENST00000478075 OTULINQ96BN8 352 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 RNF183Q96D59 192 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 PKP2Q99959 881 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 TFB2MQ9H5Q4 396 aaKnown RBP1.25□□□□□ -2.21
CALD1-218ENST00000478075 UPF2Q9HAU5 1272 aaKnown RBP1.25□□□□□ -2.21
CALD1-218ENST00000478075 SNX13Q9Y5W8 968 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 MYH15Q9Y2K3 1946 aa1.25□□□□□ -2.21
CALD1-218ENST00000478075 IGLV5-45A0A087WSX0 123 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 TARSL2A2RTX5 802 aaKnown RBP1.24□□□□□ -2.21
CALD1-218ENST00000478075 NPIPB13A6NJU9 1138 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 RASA4O43374 803 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 WDR1O75083 606 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 NDST3O95803 873 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 IGHV4-39P01824 125 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 FRMD6-AS1P0C7T7 363 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 ITGA2P17301 1181 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 CTPS1P17812 591 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 HNRNPH1P31943 449 aaKnown RBP1.24□□□□□ -2.21
CALD1-218ENST00000478075 CENPAP49450 140 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 BMXP51813 675 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 EPHB1P54762 984 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 EEF1A1P68104 462 aaKnown RBP1.24□□□□□ -2.21
CALD1-218ENST00000478075 RNASELQ05823 741 aaKnown RBP1.24□□□□□ -2.21
CALD1-218ENST00000478075 CDK18Q07002 472 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 RFTN1Q14699 578 aaPredicted RBP1.24□□□□□ -2.21
CALD1-218ENST00000478075 PLEKHG6Q3KR16 790 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 TUBB8Q3ZCM7 444 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 STXBP5Q5T5C0 1151 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 EEF1A1P5Q5VTE0 462 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 WDR73Q6P4I2 378 aa1.24□□□□□ -2.21
CALD1-218ENST00000478075 TICAM1Q8IUC6 712 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms