RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 LGMNQ99538 433 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 SEMA3CQ99985 751 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 WRAP53Q9BUR4 548 aaKnown RBP13.53□□□□□ -0.24
ACTN4-205ENST00000477174 NT5MQ9NPB1 228 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 FZD3Q9NPG1 666 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 CA5BQ9Y2D0 317 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 PCDHA3Q9Y5H8 950 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 NCOR2Q9Y618 2525 aa13.52□□□□□ -0.24
ACTN4-205ENST00000477174 TTC24A2A3L6 582 aaPredicted RBP13.52□□□□□ -0.25
ACTN4-205ENST00000477174 A6NNZ2 444 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 GIPC1O14908 333 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 PPP1R12AO14974 1030 aaPredicted RBP13.52□□□□□ -0.25
ACTN4-205ENST00000477174 RAD51BO15315 384 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 FLRT2O43155 660 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 CST8O60676 142 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 CBFA2T3O75081 653 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 NEBLO76041 1014 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 JCHAINP01591 159 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 MMP12P39900 470 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 GRK6P43250 576 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 RABIFP47224 123 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 LIG3P49916 1009 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 CLDN2P57739 230 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 COPS2P61201 443 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 MAXP61244 160 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 FAM193AP78312 1265 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 IFI35P80217 286 aaPredicted RBP13.52□□□□□ -0.25
ACTN4-205ENST00000477174 ITKQ08881 620 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 AGERQ15109 404 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 PRAMEF14Q5SWL7 426 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 N4BP2L1Q5TBK1 243 aaPredicted RBP13.52□□□□□ -0.25
ACTN4-205ENST00000477174 KYAT3Q6YP21 454 aaKnown RBP13.52□□□□□ -0.25
ACTN4-205ENST00000477174 GCNT7Q6ZNI0 430 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 LRRC57Q8N9N7 239 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.25
ACTN4-205ENST00000477174 IFT43Q96FT9 208 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 OLFM3Q96PB7 478 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 PHTF1Q9UMS5 762 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 EFR3BQ9Y2G0 817 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 PCDHB9Q9Y5E1 797 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 NYNRINQ9P2P1 1898 aaKnown RBP13.52□□□□□ -0.25
ACTN4-205ENST00000477174 TRPM6Q9BX84 2022 aa13.52□□□□□ -0.25
ACTN4-205ENST00000477174 MED19A0JLT2 244 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-205ENST00000477174 CCDC66A2RUB6 948 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 POM121BA6NF01 834 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 PGLSO95336 258 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 ADRB1P08588 477 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 KRT10P13645 584 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 TGM2P21980 687 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 KCNA4P22459 653 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 CTNNA1P35221 906 aaKnown RBP13.51□□□□□ -0.25
ACTN4-205ENST00000477174 AP1B1Q10567 949 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 SHBQ15464 509 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 TRIP6Q15654 476 aaKnown RBP13.51□□□□□ -0.25
ACTN4-205ENST00000477174 PPP2R5EQ16537 467 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 INAVAQ3KP66 663 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 ARMC12Q5T9G4 340 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 DPPA4Q7L190 304 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 SYCE1Q8N0S2 351 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 NDUFAF2Q8N183 169 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 RNF10Q8N5U6 811 aaKnown RBP13.51□□□□□ -0.25
ACTN4-205ENST00000477174 OR13H1Q8NG92 308 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 SAP25Q8TEE9 199 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 UBE2Q2Q8WVN8 375 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 KRT35Q92764 455 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 P3H4Q92791 437 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 SCRN2Q96FV2 425 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 IL12RB2Q99665 862 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 CDC6Q99741 560 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 MYOCQ99972 504 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 GPR27Q9NS67 375 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 PCOLCE2Q9UKZ9 415 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 PPIL1Q9Y3C6 166 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 RAI2Q9Y5P3 530 aa13.51□□□□□ -0.25
ACTN4-205ENST00000477174 hCG_1818297A0A087WSY0 165 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 SPTY2D1-AS1A0A0U1RR47 76 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 GRID2IPA4D2P6 1211 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 KCNK1O00180 336 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 ARHGAP6O43182 974 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 LZTS3O60299 673 aaPredicted RBP13.5□□□□□ -0.25
ACTN4-205ENST00000477174 ITGAVP06756 1048 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 C6P13671 934 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 CA4P22748 312 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 CTNNA2P26232 953 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 PEX5P50542 639 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 RWDD2BP57060 319 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 PFN3P60673 137 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 YPEL5P62699 121 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 DYNLT1P63172 113 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
ACTN4-205ENST00000477174 TRAF2Q12933 501 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 PTK2BQ14289 1009 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 LRRC14Q15048 493 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 KAZNQ674X7 775 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 NPNTQ6UXI9 565 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 LIPIQ6XZB0 460 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 PTAR1Q7Z6K3 402 aaPredicted RBP13.5□□□□□ -0.25
ACTN4-205ENST00000477174 GLRX5Q86SX6 157 aa13.5□□□□□ -0.25
ACTN4-205ENST00000477174 CCDC50Q8IVM0 306 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms