RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CHFRQ96EP1 664 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 SMIM14Q96QK8 99 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 ATP13A3Q9H7F0 1226 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 UBE2ZQ9H832 354 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-211ENST00000476772 C20orf96Q9NUD7 363 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-211ENST00000476772 SPO11Q9Y5K1 396 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 TTC34A8MYJ7 566 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 ANKRD66B4E2M5 251 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 TRAFD1O14545 582 aaPredicted RBP29.02■■■□□ 2.24
VEGFA-211ENST00000476772 LDB2O43679 373 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 PGLSO95336 258 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 ATP5DP30049 168 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 NNMTP40261 264 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 GYS2P54840 703 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 QPCTQ16769 361 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 ARMC12Q5T9G4 340 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 KCNMB4Q86W47 210 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 TERB1Q8NA31 727 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP29.02■■■□□ 2.249e-22■□□□□ 8.1
VEGFA-211ENST00000476772 MROH6A6NGR9 719 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 SOCS5O75159 536 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 BMP1P13497 986 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 SLC8A1P32418 973 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 VASPP50552 380 aaPredicted RBP29.02■■■□□ 2.24
VEGFA-211ENST00000476772 CNGA3Q16281 694 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 ITPRIPL2Q3MIP1 535 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 SFTPA1Q8IWL2 248 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 BRSK1Q8TDC3 778 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 ZFATQ9P243 1243 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 ARL5AQ9Y689 179 aa29.02■■■□□ 2.24
VEGFA-211ENST00000476772 HTRA2O43464 458 aaPredicted RBP29.01■■■□□ 2.23
VEGFA-211ENST00000476772 SERPINA4P29622 427 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 HPDP32754 393 aaPredicted RBP29.01■■■□□ 2.23
VEGFA-211ENST00000476772 HSP90AA5PQ58FG0 334 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 Q7L0L9 218 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 EXOC3L1Q86VI1 746 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 CHST14Q8NCH0 376 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 OR2A12Q8NGT7 310 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 FAM76AQ8TAV0 307 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 ZDHHC6Q9H6R6 413 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 BRD9Q9H8M2 597 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 KCTD3Q9Y597 815 aa29.01■■■□□ 2.23
VEGFA-211ENST00000476772 MBTPS2O43462 519 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 PAPSS2O95340 614 aaPredicted RBP29■■■□□ 2.23
VEGFA-211ENST00000476772 NR1D1P20393 614 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 ARNTP27540 789 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 SMAD4Q13485 552 aaKnown RBP29■■■□□ 2.23
VEGFA-211ENST00000476772 NAB1Q13506 487 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 EIF4HQ15056 248 aaKnown RBP29■■■□□ 2.23
VEGFA-211ENST00000476772 SKIV2LQ15477 1246 aaKnown RBP29■■■□□ 2.23
VEGFA-211ENST00000476772 PDPK2PQ6A1A2 396 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 KIAA0930Q6ICG6 404 aaPredicted RBP29■■■□□ 2.23
VEGFA-211ENST00000476772 PIH1D2Q8WWB5 315 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 TUBGCP5Q96RT8 1024 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 ZNF180Q9UJW8 692 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 SLC8A2Q9UPR5 921 aa29■■■□□ 2.23
VEGFA-211ENST00000476772 MUC22E2RYF6 1773 aaPredicted RBP29■■■□□ 2.23
VEGFA-211ENST00000476772 C2CD4DB7Z1M9 353 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 GOLGA8TH3BQL2 631 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 VAPBO95292 243 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 POP4O95707 220 aaKnown RBP28.99■■■□□ 2.23
VEGFA-211ENST00000476772 KRT15P19012 456 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 PAMP19021 973 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 ARCN1P48444 511 aaKnown RBP28.99■■■□□ 2.23
VEGFA-211ENST00000476772 EPHB1P54762 984 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 CBX1P83916 185 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 NLRP9Q7RTR0 991 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 PLPP6Q8IY26 295 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 OR13J1Q8NGT2 312 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 AGAP2Q99490 1192 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 CDX2Q99626 313 aaPredicted RBP28.99■■■□□ 2.23
VEGFA-211ENST00000476772 MTG2Q9H4K7 406 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 PSAT1Q9Y617 370 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 EYSQ5T1H1 3165 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 TICRRQ7Z2Z1 1910 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 AURKAO14965 403 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 EIF2DP41214 584 aaKnown RBP28.99■■■□□ 2.23
VEGFA-211ENST00000476772 RECQLP46063 649 aaPredicted RBP28.99■■■□□ 2.23
VEGFA-211ENST00000476772 GRIA4P48058 902 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 ST8SIA6P61647 398 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 LAMB3Q13751 1172 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 PTPRRQ15256 657 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 TEDDM1Q5T9Z0 273 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 MDGA1Q8NFP4 955 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 MZB1Q8WU39 189 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 CPEB1Q9BZB8 566 aaKnown RBP28.99■■■□□ 2.23
VEGFA-211ENST00000476772 IARS2Q9NSE4 1012 aaKnown RBP28.99■■■□□ 2.23
VEGFA-211ENST00000476772 PLA2G4CQ9UP65 541 aa28.99■■■□□ 2.23
VEGFA-211ENST00000476772 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.98■■■□□ 2.23
VEGFA-211ENST00000476772 BUD23O43709 281 aaKnown RBP28.98■■■□□ 2.23
VEGFA-211ENST00000476772 SOX9P48436 509 aa28.98■■■□□ 2.23
VEGFA-211ENST00000476772 RAD51Q06609 339 aa28.98■■■□□ 2.23
VEGFA-211ENST00000476772 AAK1Q2M2I8 961 aa28.98■■■□□ 2.23
VEGFA-211ENST00000476772 PRPF38BQ5VTL8 546 aaKnown RBP28.98■■■□□ 2.23
VEGFA-211ENST00000476772 MICALCLQ6ZW33 695 aa28.98■■■□□ 2.23
VEGFA-211ENST00000476772 GLT6D1Q7Z4J2 308 aa28.98■■■□□ 2.23
VEGFA-211ENST00000476772 TRABD2AQ86V40 505 aa28.98■■■□□ 2.23
VEGFA-211ENST00000476772 SRRM1Q8IYB3 904 aaKnown RBP28.98■■■□□ 2.23
VEGFA-211ENST00000476772 PAF1Q8N7H5 531 aa28.98■■■□□ 2.23
VEGFA-211ENST00000476772 ZNF366Q8N895 744 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms