RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 INCA1Q0VD86 236 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 ZNF846Q147U1 533 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 JADE1Q6IE81 842 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 ZNF668Q96K58 619 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 BEGAINQ9BUH8 593 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 MTF2Q9Y483 593 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 PGK1P00558 417 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 PCYT1AP49585 367 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 LAMTOR4Q0VGL1 99 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 TUBA3CQ13748 450 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 SPCS2Q15005 226 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 Q3C1V9 767 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 ATF7IP2Q5U623 682 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 AGAP7PQ5VUJ5 663 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 PSTKQ8IV42 348 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 FUNDC1Q8IVP5 155 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 AKT1S1Q96B36 256 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 ROPN1LQ96C74 230 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 NSMCE3Q96MG7 304 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 SIAEQ9HAT2 523 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 CASS4Q9NQ75 786 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 KLHL8Q9P2G9 620 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 TRPC5Q9UL62 973 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 ACOT9Q9Y305 439 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 ZFC3H1O60293 1989 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 SYNCRIPO60506 623 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 MAFO75444 373 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 MT-CO1P00395 513 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 NCAM1P13591 858 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 YWHAQP27348 245 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 EEF1DP29692 281 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 GJA9P57773 515 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 AQP6Q13520 282 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 PKDCCQ504Y2 493 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 FKBP1CQ5VVH2 108 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 LCN8Q6JVE9 175 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 RPS27LQ71UM5 84 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 SLC26A9Q7LBE3 791 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 PIWIL3Q7Z3Z3 882 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 NT5DC4Q86YG4 428 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 CEP97Q8IW35 865 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 ZBTB8OSQ8IWT0 167 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 HPDLQ96IR7 371 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 CTRCQ99895 268 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 APOL2Q9BQE5 337 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 NT5C1AQ9BXI3 368 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 C8orf4Q9NR00 106 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 ABCD2Q9UBJ2 740 aa18.72■□□□□ 0.59
ECHDC1-214ENST00000474289 LACTBL1A8MY62 500 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 TPD52L2O43399 206 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 NMBRP28336 390 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 AXLP30530 894 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 RAD23AP54725 363 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 ADARB1P78563 741 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 IFITM3Q01628 133 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 CLPPQ16740 277 aaPredicted RBP18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 TRPV3Q8NET8 790 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 NRBF2Q96F24 287 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 PCYT2Q99447 389 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 MRPL46Q9H2W6 279 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 SNX25Q9H3E2 840 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 HMG20AQ9NP66 347 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 POU2F3Q9UKI9 436 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 COL4A5P29400 1685 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 FAM47E-STBD1D6RA91 191 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 TPH1P17752 444 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 PLA2G16P53816 162 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 YBX1P67809 324 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 TMEM132AQ24JP5 1023 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 BROXQ5VW32 411 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 FAM131BQ86XD5 332 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 SFRP1Q8N474 314 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 PTCD2Q8WV60 388 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 RHOBTB2Q9BYZ6 727 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 CDT1Q9H211 546 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 FBRSL1Q9HCM7 1045 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 ACTR3BQ9P1U1 418 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 VWA7Q9Y334 891 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 NOX1Q9Y5S8 564 aa18.71■□□□□ 0.59
ECHDC1-214ENST00000474289 TTC24A2A3L6 582 aaPredicted RBP18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 WNT10BO00744 389 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 AHSGP02765 367 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 ALOX5P09917 674 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 NR4A1P22736 598 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 RFC2P35250 354 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 DNASE1L3Q13609 305 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 SF3B4Q15427 424 aaKnown RBP eCLIP18.7■□□□□ 0.581e-9■■■■■ 43.2
ECHDC1-214ENST00000474289 SOWAHAQ2M3V2 549 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 FAM35AQ86V20 835 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 LRRC71Q8N4P6 559 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 SLC35F5Q8WV83 523 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 CPB2Q96IY4 423 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 FAR2Q96K12 515 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 RPL10LQ96L21 214 aaKnown RBP18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 MUS81Q96NY9 551 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 EHD1Q9H4M9 534 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 AKIP1Q9NQ31 210 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 MAP10Q9P2G4 905 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 ERVK-11Q9UQG0 969 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 COL11A1P12107 1806 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms