RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 GRAMD4Q6IC98 578 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 TANGO2Q6ICL3 276 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF425Q6IV72 752 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 MFSD5Q6N075 450 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 NFRKBQ6P4R8 1299 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 CHSY3Q70JA7 882 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 SFRP1Q8N474 314 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 TMEM145Q8NBT3 493 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 GLIS3Q8NEA6 775 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 OR10H5Q8NGA6 315 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 SETD6Q8TBK2 473 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 XAGE3Q8WTP9 111 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 HEXDCQ8WVB3 486 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 OR1E3Q8WZA6 343 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 TNFRSF14Q92956 283 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 NT5C3BQ969T7 300 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 APIPQ96GX9 242 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 CEP170P1Q96L14 293 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 FER1L6-AS2Q96M78 137 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 RIT2Q99578 217 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 RBM4BQ9BQ04 359 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 WACQ9BTA9 647 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 RBM4Q9BWF3 364 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 TBC1D10AQ9BXI6 508 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 C6orf62Q9GZU0 229 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC5A7Q9GZV3 580 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 USP44Q9H0E7 712 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 FBXO28Q9NVF7 368 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 CYP39A1Q9NYL5 469 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 HCN2Q9UL51 889 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 PPM1HQ9ULR3 514 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 PCDHA7Q9UN72 937 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 USP34Q70CQ2 3546 aa6.15□□□□□ -1.43
SMARCE1-208ENST00000474246 ITGB4P16144 1822 aa6.15□□□□□ -1.43
SMARCE1-208ENST00000474246 A0A1B0GTQ1 180 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PRAMEF22A3QJZ6 481 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 B4E1Z4 1266 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 BTN3A1O00481 513 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 CDK14O94921 469 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 UPP2O95045 317 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PTBP3O95758 552 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 TUBB4AP04350 444 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 FAM86B2P0C5J1 330 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 BMP2P12643 396 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 JUPP14923 745 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 HLA-FP30511 346 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 HMOX2P30519 316 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 CAPGP40121 348 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 CTSOP43234 321 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 ADKP55263 362 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SRSF1Q07955 248 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 LRRC26Q2I0M4 334 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PLEKHO1Q53GL0 409 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SH3PXD2AQ5TCZ1 1133 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 DPY19L2P1Q6NXN4 242 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 GALNT18Q6P9A2 607 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 AFTPHQ6ULP2 937 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 MSANTD1Q6ZTZ1 278 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 C3orf62Q6ZUJ4 267 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 EFL1Q7Z2Z2 1120 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 NEK8Q86SG6 692 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 CMIPQ8IY22 773 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 TBC1D19Q8N5T2 526 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 CNBD1Q8NA66 436 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 BHLHE23Q8NDY6 225 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 GPR152Q8TDT2 470 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 DQX1Q8TE96 717 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 RNF125Q96EQ8 232 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 OPALINQ96PE5 141 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 ZSCAN10Q96SZ4 725 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 KCNS3Q9BQ31 491 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 COLEC11Q9BWP8 271 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PCED1AQ9H1Q7 454 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 TRIM45Q9H8W5 580 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 BRF2Q9HAW0 419 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PALMDQ9NP74 551 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SAYSD1Q9NPB0 183 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PIH1D3Q9NQM4 214 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SPTLC3Q9NUV7 552 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 ARHGEF38Q9NXL2 777 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 NDUFA13Q9P0J0 144 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SAMD15Q9P1V8 674 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 MINPP1Q9UNW1 487 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SMG5Q9UPR3 1016 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 RWDD3Q9Y3V2 267 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 TCRBV16S1A1N1A0A5B0 115 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 TYW5A2RUC4 315 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SYN3O14994 580 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 FANCGO15287 622 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 KCNN4O15554 427 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 BMP10O95393 424 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 LGI1O95970 557 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PRLP01236 227 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 VCLP18206 1134 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 TGM1P22735 817 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 PDHA2P29803 388 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 GCH1P30793 250 aa6.14□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC26A3P40879 764 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms