RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 DSC2Q02487 901 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 ELP6Q0PNE2 266 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 OVGP1Q12889 678 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 RALGDSQ12967 914 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 ZBTB17Q13105 803 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 KAZNQ674X7 775 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 ALG1LQ6GMV1 187 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 ZSCAN30Q86W11 494 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 NAXDQ8IW45 347 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 SLC22A18ASQ8N1D0 253 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.07■□□□□ 0.64
PTCD3-210ENST00000473829 ASB12Q8WXK4 309 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 SKA1Q96BD8 255 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 KLHDC7BQ96G42 594 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 ZNF830Q96NB3 372 aaPredicted RBP19.07■□□□□ 0.64
PTCD3-210ENST00000473829 BTBD3Q9Y2F9 522 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 MACROD2A1Z1Q3 448 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 CST8O60676 142 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 SOCS5O75159 536 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 ZRANB2O95218 330 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTCD3-210ENST00000473829 C6P13671 934 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 ZFXP17010 805 aaPredicted RBP19.06■□□□□ 0.64
PTCD3-210ENST00000473829 IGFALSP35858 605 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 NIPAL4Q0D2K0 466 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 SGCGQ13326 291 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 TFDP3Q5H9I0 405 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 ERAP2Q6P179 960 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 KYAT3Q6YP21 454 aaKnown RBP19.06■□□□□ 0.64
PTCD3-210ENST00000473829 DBX2Q6ZNG2 339 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 CNTD1Q8N815 330 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 EXD1Q8NHP7 514 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 ARRDC2Q8TBH0 407 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 PDCD6IPQ8WUM4 868 aaKnown RBP19.06■□□□□ 0.64
PTCD3-210ENST00000473829 SPOCK2Q92563 424 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 CALR3Q96L12 384 aaKnown RBP19.06■□□□□ 0.64
PTCD3-210ENST00000473829 LENG8Q96PV6 779 aaPredicted RBP19.06■□□□□ 0.64
PTCD3-210ENST00000473829 HERPUD2Q9BSE4 406 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 CEP41Q9BYV8 373 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 POLR1EQ9GZS1 481 aaKnown RBP19.06■□□□□ 0.64
PTCD3-210ENST00000473829 GPR27Q9NS67 375 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 TTLL3Q9Y4R7 772 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 PCDHGB2Q9Y5G2 931 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 PCDHA3Q9Y5H8 950 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 NCOR2Q9Y618 2525 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 PCNX2A6NKB5 2137 aa19.06■□□□□ 0.64
PTCD3-210ENST00000473829 A6NNZ2 444 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 TM7SF2O76062 418 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 CPP00450 1065 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 CEACAM1P13688 526 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 CTNNA2P26232 953 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 LIG3P49916 1009 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 IFI35P80217 286 aaPredicted RBP19.05■□□□□ 0.64
PTCD3-210ENST00000473829 ITKQ08881 620 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 AP1B1Q10567 949 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 KIF5AQ12840 1032 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 PTPRRQ15256 657 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 RALGPS1Q5JS13 557 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 TPRG1LQ5T0D9 272 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 N4BP2L1Q5TBK1 243 aaPredicted RBP19.05■□□□□ 0.64
PTCD3-210ENST00000473829 Q6ZSR6 202 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 PTAR1Q7Z6K3 402 aaPredicted RBP19.05■□□□□ 0.64
PTCD3-210ENST00000473829 NT5DC3Q86UY8 548 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 GATAD2AQ86YP4 633 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 CCDC50Q8IVM0 306 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 RCOR2Q8IZ40 523 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 PAF1Q8N7H5 531 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 TP53I13Q8NBR0 393 aaPredicted RBP19.05■□□□□ 0.64
PTCD3-210ENST00000473829 DENND6BQ8NEG7 585 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 KIAA1524Q8TCG1 905 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 ALG3Q92685 438 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 CENPTQ96BT3 561 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 RBM41Q96IZ5 413 aaKnown RBP19.05■□□□□ 0.64
PTCD3-210ENST00000473829 IL12RB2Q99665 862 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 ERVMER34-1Q9H9K5 563 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 MBNL1Q9NR56 388 aaKnown RBP19.05■□□□□ 0.64
PTCD3-210ENST00000473829 B4GALT6Q9UBX8 382 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 PCOLCE2Q9UKZ9 415 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTCD3-210ENST00000473829 PCDHB9Q9Y5E1 797 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 ADGRG1Q9Y653 693 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 HS3ST3A1Q9Y663 406 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 CAPN6Q9Y6Q1 641 aa19.05■□□□□ 0.64
PTCD3-210ENST00000473829 SPAARA0A1B0GVQ0 90 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 A8MX80 341 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 PCDHGA12O60330 932 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 CBFA2T3O75081 653 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 PGLSO95336 258 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 JCHAINP01591 159 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 PDHA1P08559 390 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 GM2AP17900 193 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 PEX5P50542 639 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 TFDP2Q14188 446 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 PDK1Q15118 436 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 IRF4Q15306 451 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 DPPA4Q7L190 304 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 HAUS1Q96CS2 278 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 SMIM14Q96QK8 99 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 HEMGNQ9BXL5 484 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 AMACRQ9UHK6 382 aa19.04■□□□□ 0.64
PTCD3-210ENST00000473829 RAI2Q9Y5P3 530 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms