RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 PAF1Q8N7H5 531 aa16.51■□□□□ 0.23
GTF3C2-209ENST00000470115 ZNF548Q8NEK5 533 aaPredicted RBP16.51■□□□□ 0.23
GTF3C2-209ENST00000470115 CTNNBL1Q8WYA6 563 aaPredicted RBP16.51■□□□□ 0.23
GTF3C2-209ENST00000470115 ECHDC3Q96DC8 303 aa16.51■□□□□ 0.23
GTF3C2-209ENST00000470115 ZNHIT6Q9NWK9 470 aaKnown RBP16.51■□□□□ 0.23
GTF3C2-209ENST00000470115 NLGN3Q9NZ94 848 aa16.51■□□□□ 0.23
GTF3C2-209ENST00000470115 ATP8A1Q9Y2Q0 1164 aa16.51■□□□□ 0.23
GTF3C2-209ENST00000470115 KNTC1P50748 2209 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 PKD1L2Q7Z442 2459 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 H3BM21 787 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 K7ESM1 405 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 TRAFD1O14545 582 aaPredicted RBP16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 PROSCO94903 275 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 ALPPL2P10696 532 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 MYF5P13349 255 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 HNF1BP35680 557 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 AP1S1P61966 158 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 ILKQ13418 452 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 PTK2BQ14289 1009 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 ZNF235Q14590 738 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 TSR1Q2NL82 804 aaKnown RBP16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 WSCD2Q2TBF2 565 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 HES3Q5TGS1 186 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 PROSER1Q86XN7 944 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 PGBD5Q8N414 524 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 ATPAF2Q8N5M1 289 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 PDCD7Q8N8D1 485 aaKnown RBP16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 FAM71BQ8TC56 605 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 LMX1AQ8TE12 382 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 APOLD1Q96LR9 279 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 RBSNQ9H1K0 784 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 TCEAL2Q9H3H9 227 aaPredicted RBP16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 DEF6Q9H4E7 631 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 UVRAGQ9P2Y5 699 aa16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 PNMA8BQ9ULN7 279 aaPredicted RBP16.5■□□□□ 0.23
GTF3C2-209ENST00000470115 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 SSU72P8A0A1W2PR75 194 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 AQP9O43315 295 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 LZTS3O60299 673 aaPredicted RBP16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 SERPINB6P35237 376 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 ARSEP51690 589 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 ADKP55263 362 aaKnown RBP16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 POLR2LP62875 67 aaKnown RBP16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 GAS2L3Q86XJ1 694 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 RBFAQ8N0V3 343 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 KCTD6Q8NC69 237 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 CHP1Q99653 195 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 RCOR3Q9P2K3 495 aaPredicted RBP16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 PCDHGC4Q9Y5F7 938 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 CSNK1G3Q9Y6M4 447 aa16.49■□□□□ 0.23
GTF3C2-209ENST00000470115 LRRK1Q38SD2 2015 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 LAMA5O15230 3695 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 LY6G6EA0A0G2JKS1 128 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 A8MX80 341 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 TOR1BO14657 336 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 AKR1B10O60218 316 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 GCATO75600 419 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 TPM1P09493 284 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 CKMT1AP12532 417 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 CR2P20023 1033 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 HSPA9P38646 679 aaKnown RBP16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 TAS2R40P59535 323 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 CYP4F3Q08477 520 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 TARDBPQ13148 414 aaKnown RBP eCLIP16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 C1orf61Q13536 156 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 INPP5AQ14642 412 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 AGERQ15109 404 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 DEFB133Q30KQ1 61 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 FAXCQ5TGI0 409 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 MARC1Q5VT66 337 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 LIPIQ6XZB0 460 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 MACC1Q6ZN28 852 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 PHACTR4Q8IZ21 702 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 PCDH19Q8TAB3 1148 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 NSMCE1Q8WV22 266 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 BTN2A2Q8WVV5 523 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 NUDCD1Q96RS6 583 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 APOOQ9BUR5 198 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 DUSP23Q9BVJ7 150 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 NOD2Q9HC29 1040 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 SCUBE2Q9NQ36 999 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 ABHD10Q9NUJ1 306 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 APOBEC3BQ9UH17 382 aaKnown RBP16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 U3KQA8 63 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 ANKRD36A6QL64 1941 aa16.48■□□□□ 0.23
GTF3C2-209ENST00000470115 CFAP69A5D8W1 941 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 MFSD11O43934 449 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 MFAP3LO75121 409 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 RECQL5O94762 991 aaPredicted RBP16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 TMEM253P0C7T8 217 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 MMP13P45452 471 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 MAXP61244 160 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 E2F1Q01094 437 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 INSM1Q01101 510 aaPredicted RBP16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 RALGDSQ12967 914 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 ANKRD20A8PQ5CZ79 823 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 PRRT3Q5FWE3 981 aa16.47■□□□□ 0.23
GTF3C2-209ENST00000470115 DPPA4Q7L190 304 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms