RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 CAPRIN2Q6IMN6 1127 aaKnown RBP3.28□□□□□ -1.88
TPR-204ENST00000469463 C8orf82Q6P1X6 216 aaPredicted RBP3.28□□□□□ -1.88
TPR-204ENST00000469463 KLHL24Q6TFL4 600 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 DSELQ8IZU8 1212 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 CNTROBQ8N137 903 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 PAF1Q8N7H5 531 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 C11orf65Q8NCR3 313 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 ST8SIA4Q92187 359 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 PHF21BQ96EK2 531 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 ZNF570Q96NI8 536 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 FIZ1Q96SL8 496 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 MSTO1Q9BUK6 570 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 WASH6PQ9NQA3 447 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 HCN3Q9P1Z3 774 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 PCDHGB1Q9Y5G3 927 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 RAI2Q9Y5P3 530 aa3.28□□□□□ -1.88
TPR-204ENST00000469463 GOLGA6L10A0A0M3HER8 536 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 GAGE10A6NGK3 116 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 A6NLC8 198 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 VNN2O95498 520 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 ETFAP13804 333 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 COX7A2P14406 83 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 PDLIM4P50479 330 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 EFNA5P52803 228 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 ART1P52961 327 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 DSCR9P59020 149 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 ST3GAL1Q11201 340 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 GRIK3Q13003 919 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 DHX34Q14147 1143 aaKnown RBP3.27□□□□□ -1.89
TPR-204ENST00000469463 NEDD9Q14511 834 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 SOWAHAQ2M3V2 549 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 TCTN1Q2MV58 587 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 MMEL1Q495T6 779 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 SLC9C2Q5TAH2 1124 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 NAA35Q5VZE5 725 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 NEK10Q6ZWH5 1172 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 NOXA1Q86UR1 476 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 DHX40Q8IX18 779 aaKnown RBP3.27□□□□□ -1.89
TPR-204ENST00000469463 FAM216AQ8WUB2 273 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 ZUFSPQ96AP4 578 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 RTP4Q96DX8 246 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 RRP36Q96EU6 259 aaKnown RBP3.27□□□□□ -1.89
TPR-204ENST00000469463 LBHD1Q9BQE6 289 aaPredicted RBP3.27□□□□□ -1.89
TPR-204ENST00000469463 SLC25A33Q9BSK2 321 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 FUZQ9BT04 418 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 SMYD2Q9NRG4 433 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 C9orf78Q9NZ63 289 aaPredicted RBP3.27□□□□□ -1.89
TPR-204ENST00000469463 MDFICQ9P1T7 246 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 SLC13A4Q9UKG4 626 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 SARDHQ9UL12 918 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 CDC14AQ9UNH5 594 aa3.27□□□□□ -1.89
TPR-204ENST00000469463 CCDC189A1A4V9 331 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 J3KR12 359 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 ZIC3O60481 467 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 NDUFB4O95168 129 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 FGF3P11487 239 aaPredicted RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 KRT10P13645 584 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 CD58P19256 250 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 RYKP34925 604 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 KRT9P35527 623 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 CXCR3P49682 368 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 GNAQP50148 359 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 PEX5P50542 639 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 RRP1P56182 461 aaKnown RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 SORDQ00796 357 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 MYBPHQ13203 477 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 HIST2H2ACQ16777 129 aaPredicted RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 SLC9B1Q4ZJI4 515 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 ALFQ53S48 1182 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 CPLX2Q6PUV4 134 aaKnown RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 SLC46A3Q7Z3Q1 461 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 ZC3HC1Q86WB0 502 aaKnown RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 FOXP4Q8IVH2 680 aaPredicted RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 AADATQ8N5Z0 425 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 SCCPDHQ8NBX0 429 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 CADM4Q8NFZ8 388 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 ZCCHC10Q8TBK6 192 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 NR4A3Q92570 626 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 FBXL8Q96CD0 374 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 SAAL1Q96ER3 474 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 ADGRG7Q96K78 797 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 LMLNQ96KR4 655 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 SEC62Q99442 399 aaKnown RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 KXD1Q9BQD3 176 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 MMTAG2Q9BU76 263 aaKnown RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 PAIP1Q9H074 479 aaKnown RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 KCND2Q9NZV8 630 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 MPP6Q9NZW5 540 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 HSPB7Q9UBY9 170 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 RCOR1Q9UKL0 485 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 AGO1Q9UL18 857 aaKnown RBP3.26□□□□□ -1.89
TPR-204ENST00000469463 SNX9Q9Y5X1 595 aa3.26□□□□□ -1.89
TPR-204ENST00000469463 A0A0U1RQF3 1178 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 LRRC53A6NM62 1247 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 EIF3CLB5ME19 914 aaKnown RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 LDLRAD4O15165 306 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 SOX30O94993 753 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 ZBTB11O95625 1053 aaPredicted RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 MT-CYBP00156 380 aaPredicted RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 AFPP02771 609 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms