RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TPRP12270 2363 aaKnown RBP14.63□□□□□ -0.07
COL27A1-203ENST00000468565 J3KR12 359 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 UGT2B4P06133 528 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 MYBL2P10244 700 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 HNRNPA2B1P22626 353 aaKnown RBP14.63□□□□□ -0.07
COL27A1-203ENST00000468565 SLC7A5Q01650 507 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 GRM3Q14832 879 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 EMBQ6PCB8 327 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 GSPT2Q8IYD1 628 aaKnown RBP14.63□□□□□ -0.07
COL27A1-203ENST00000468565 FAM174AQ8TBP5 190 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 ACTRT1Q8TDG2 376 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 SETD7Q8WTS6 366 aaKnown RBP14.63□□□□□ -0.07
COL27A1-203ENST00000468565 HSPH1Q92598 858 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 FEM1CQ96JP0 617 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 KLHL32Q96NJ5 620 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.63□□□□□ -0.07
COL27A1-203ENST00000468565 VPS18Q9P253 973 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 DKK3Q9UBP4 350 aa14.63□□□□□ -0.07
COL27A1-203ENST00000468565 TSPAN6O43657 245 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 TRIM16O95361 564 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 AKT2P31751 481 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 ABL2P42684 1182 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 RFTN1Q14699 578 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-203ENST00000468565 HADHQ16836 314 aaKnown RBP14.62□□□□□ -0.07
COL27A1-203ENST00000468565 INAVAQ3KP66 663 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 SEL1L3Q68CR1 1132 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 TXNRD3NBQ6F5E7 133 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 DAAM2Q86T65 1068 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 HCAR2Q8TDS4 363 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 CSPG4P5Q96PW8 444 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 CDC6Q99741 560 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 SP110Q9HB58 689 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 CTTNBP2NLQ9P2B4 639 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 RCOR3Q9P2K3 495 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-203ENST00000468565 AMFRQ9UKV5 643 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 WASF3Q9UPY6 502 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 ARID1BQ8NFD5 2236 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-203ENST00000468565 PTPRBP23467 1997 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 PGRMC1O00264 195 aaKnown RBP14.62□□□□□ -0.07
COL27A1-203ENST00000468565 DFFAO00273 331 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 SLC31A1O15431 190 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 CEP104O60308 925 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 GRK6P43250 576 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 RXRGP48443 463 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 CSNK1DP48730 415 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 IL10RBQ08334 325 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 FOXC1Q12948 553 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 NETO2Q8NC67 525 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 KLHDC7BQ96G42 594 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 KRT12Q99456 494 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 PCDH18Q9HCL0 1135 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 PSD3Q9NYI0 1048 aa14.62□□□□□ -0.07
COL27A1-203ENST00000468565 AREL1O15033 823 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 PROSCO94903 275 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 HEXIM1O94992 359 aaKnown RBP14.61□□□□□ -0.07
COL27A1-203ENST00000468565 AMPD1P23109 780 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 ARRB1P49407 418 aaPredicted RBP14.61□□□□□ -0.07
COL27A1-203ENST00000468565 SUOXP51687 545 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 SHBQ15464 509 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 NT5DC3Q86UY8 548 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 SPATS2Q86XZ4 545 aaKnown RBP14.61□□□□□ -0.07
COL27A1-203ENST00000468565 GOLGA6L1Q8N7Z2 621 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 SLC35G2Q8TBE7 412 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 RHBDD1Q8TEB9 315 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 ASB12Q8WXK4 309 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 KLK6Q92876 244 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 CAVIN3Q969G5 261 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 EXOC2Q96KP1 924 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 ZNF599Q96NL3 588 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 TUBGCP5Q96RT8 1024 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 SLC17A9Q9BYT1 436 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 IPO11Q9UI26 975 aaKnown RBP14.61□□□□□ -0.07
COL27A1-203ENST00000468565 ADAM21Q9UKJ8 722 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 HS3ST3A1Q9Y663 406 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 ACACBO00763 2458 aa14.61□□□□□ -0.07
COL27A1-203ENST00000468565 TSPAN11A1L157 253 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 INSIG1O15503 277 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 SPINT1O43278 529 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 EPHA8P29322 1005 aaPredicted RBP14.6□□□□□ -0.07
COL27A1-203ENST00000468565 MAN1A1P33908 653 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 SERPINB6P35237 376 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 IL9RQ01113 521 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 ARHGAP36Q6ZRI8 547 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 ABI3BPQ7Z7G0 1075 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 RHOT2Q8IXI1 618 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 SAP25Q8TEE9 199 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 ZNF641Q96N77 438 aaPredicted RBP14.6□□□□□ -0.07
COL27A1-203ENST00000468565 C1QTNF2Q9BXJ5 285 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 CA5BQ9Y2D0 317 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 BTBD3Q9Y2F9 522 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 GOLGA6BA6NDN3 693 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 CCDC188H7C350 402 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 THEGLP0DJG4 465 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 CDH6P55285 790 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 NSUN2Q08J23 767 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL27A1-203ENST00000468565 FGL2Q14314 439 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 KRT81Q14533 505 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 PRAMEF14Q5SWL7 426 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 TMCO4Q5TGY1 634 aa14.6□□□□□ -0.07
COL27A1-203ENST00000468565 GCNT7Q6ZNI0 430 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms