RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 TM7SF2O76062 418 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 PAPSS2O95340 614 aaPredicted RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 KLKB1P03952 638 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 MYL4P12829 197 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 CD1EP15812 388 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 TFEBP19484 476 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 RPL14P50914 215 aaKnown RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 RAP1GDS1P52306 607 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 PRAMEP78395 509 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SCUBE1Q8IWY4 988 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 ULK2Q8IYT8 1036 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 TXNDC5Q8NBS9 432 aaKnown RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 IFT43Q96FT9 208 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SPON2Q9BUD6 331 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 MRPL46Q9H2W6 279 aaKnown RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 HIPK3Q9H422 1215 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 A0A087X1B8 175 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SLC7A4O43246 635 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 GRID2O43424 1007 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 ZMPSTE24O75844 475 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 EFEMP2O95967 443 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 JUNP05412 331 aaKnown RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 HMGA1P17096 107 aaKnown RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 DNAJB1P25685 340 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 EPHA3P29320 983 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SGSHP51688 502 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 GNA12Q03113 381 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 RCN1Q15293 331 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 C5orf22Q49AR2 442 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 IL31Q6EBC2 164 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 ARHGAP24Q8N264 748 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 PRICKLE1Q96MT3 831 aaPredicted RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 CLSTN3Q9BQT9 956 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 NUF2Q9BZD4 464 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 C1orf21Q9H246 121 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 TCF7L2Q9NQB0 619 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SLC7A8Q9UHI5 535 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 CRYL1Q9Y2S2 319 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 H3BNC9 293 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 HDAC3O15379 428 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 S1PR4O95977 384 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 CCDC166P0CW27 439 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 KCNA5P22460 613 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 RGRP47804 291 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 PTDSS1P48651 473 aaKnown RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 TUFMP49411 452 aaKnown RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 COPAP53621 1224 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 SESN3P58005 492 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 TSNAXIP1Q2TAA8 658 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 DNAL1Q4LDG9 190 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 RALGPS1Q5JS13 557 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 ACBD5Q5T8D3 534 aaPredicted RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 HECTD2Q5U5R9 776 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 KIAA1841Q6NSI8 718 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 DTX3LQ8TDB6 740 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 ANKRD49Q8WVL7 239 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 WBP2Q969T9 261 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 DNAJC1Q96KC8 554 aaKnown RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 EXOC2Q96KP1 924 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 MRPL57Q9BQC6 102 aaKnown RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 MFSD1Q9H3U5 465 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 GPAMQ9HCL2 828 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.49□□□□□ -0.57
HPS1-208ENST00000467246 TMEM233B4DJY2 109 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 SLC11A2P49281 568 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 VEGFBP49765 207 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 CLCN5P51795 746 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 CCNG1P51959 295 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 CDKN2DP55273 166 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 PRKAA1Q13131 559 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 HECTD3Q5T447 861 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 SEL1L3Q68CR1 1132 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 TMCO2Q7Z6W1 182 aaPredicted RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 OR13C4Q8NGS5 318 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 PANX3Q96QZ0 392 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 RNF38Q9H0F5 515 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 POMKQ9H5K3 350 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 CWH43Q9H720 699 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 CYP4F12Q9HCS2 524 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 G3BP2Q9UN86 482 aaKnown RBP11.49□□□□□ -0.57
HPS1-208ENST00000467246 VWA7Q9Y334 891 aa11.49□□□□□ -0.57
HPS1-208ENST00000467246 A0A088AWK7 358 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 A0A1B0GVG6 124 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 SCAMP3O14828 347 aaKnown RBP11.48□□□□□ -0.57
HPS1-208ENST00000467246 TSPAN3O60637 253 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 PSMG1O95456 288 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 LMNAP02545 664 aaKnown RBP11.48□□□□□ -0.57
HPS1-208ENST00000467246 CXCL10P02778 98 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 IRF1P10914 325 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 PRKAA2P54646 552 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 FAM83EQ2M2I3 478 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 LSM12Q3MHD2 195 aaKnown RBP11.48□□□□□ -0.57
HPS1-208ENST00000467246 TMEM207Q6UWW9 146 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 FRMD7Q6ZUT3 714 aa11.48□□□□□ -0.57
HPS1-208ENST00000467246 RPS27LQ71UM5 84 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms