RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PCDHA12Q9UN75 941 aa4.54□□□□□ -1.68
CDC42BPA-211ENST00000466538 A3GALT2U3KPV4 340 aa4.54□□□□□ -1.68
CDC42BPA-211ENST00000466538 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 A6NNC1 897 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CHL1O00533 1208 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 KLK8O60259 260 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 NDUFS3O75489 264 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 OR2C1O95371 312 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 FGBP02675 491 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 MMP2P08253 660 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 TFPIP10646 304 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 ZNF182P17025 639 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 HOXA13P31271 388 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 SHMT1P34896 483 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 UBA7P41226 1012 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CXCR3P49682 368 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CLCN5P51795 746 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 NLRP5P59047 1200 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 DUSP6Q16828 381 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 SOWAHCQ53LP3 525 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 EPHA10Q5JZY3 1008 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 MANEAQ5SRI9 462 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 C6orf141Q5SZD1 244 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 MORN5Q5VZ52 161 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 JADE1Q6IE81 842 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 PLEKHA7Q6IQ23 1121 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CES5AQ6NT32 575 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 TMEM71Q6P5X7 295 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 SYCE2Q6PIF2 218 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 GLDNQ6ZMI3 551 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 SLC16A12Q6ZSM3 486 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 TRILQ7L0X0 811 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CHST9Q7L1S5 443 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 LINGO2Q7L985 606 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 TRAPPC11Q7Z392 1133 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 TAGAPQ8N103 731 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 PABPC5Q96DU9 382 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CALML4Q96GE6 196 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 WDFY2Q96P53 400 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 SERINC2Q96SA4 455 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 NUF2Q9BZD4 464 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 PDZD7Q9H5P4 517 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 KIF9Q9HAQ2 790 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CTNNAL1Q9UBT7 734 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 ADD3Q9UEY8 706 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 NFE2L3Q9Y4A8 694 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 SESN1Q9Y6P5 492 aa4.53□□□□□ -1.68
CDC42BPA-211ENST00000466538 CDRT15L2A8MXV6 281 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 MASP2O00187 686 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 HCRTR2O43614 444 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ATP2C2O75185 946 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 KRT10P13645 584 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ETFAP13804 333 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 TMEM11P17152 192 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 CHRNB2P17787 502 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 CD58P19256 250 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ITGAXP20702 1163 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 EDN2P20800 178 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 TBXAS1P24557 533 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 CHATP28329 748 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 DCTDP32321 178 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 CDH8P55286 799 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ST3GAL1Q11201 340 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 GRIK3Q13003 919 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 CAPSQ13938 189 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ARHGEF6Q15052 776 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ADIPOQQ15848 244 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 SRSF7Q16629 238 aaKnown RBP eCLIP4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 SMN1Q16637 294 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ALG11Q2TAA5 492 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ESCO2Q56NI9 601 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 SGO1Q5FBB7 561 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 PARM1Q6UWI2 310 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 SZRD1Q7Z422 152 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 GALNT5Q7Z7M9 940 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 TDRPQ86YL5 185 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 WDR63Q8IWG1 891 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 SFTPA2Q8IWL1 248 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 HACE1Q8IYU2 909 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 SRBD1Q8N5C6 995 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ARFGAP1Q8N6T3 406 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 BEST2Q8NFU1 509 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 GABPB2Q8TAK5 448 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 DDB2Q92466 427 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ERP27Q96DN0 273 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ARHGEF26Q96DR7 871 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 C1orf74Q96LT6 269 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 GFM1Q96RP9 751 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 FAM110AQ9BQ89 295 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 MAK16Q9BXY0 300 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 LHPPQ9H008 270 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 PLSCR4Q9NRQ2 329 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ANKEF1Q9NU02 776 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 PTGFRNQ9P2B2 879 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 BTBD3Q9Y2F9 522 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 SNX8Q9Y5X2 465 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 HS3ST3B1Q9Y662 390 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 CEPT1Q9Y6K0 416 aa4.52□□□□□ -1.69
CDC42BPA-211ENST00000466538 ZNF804BA4D1E1 1349 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms