RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 MCUQ8NE86 351 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 C1orf216Q8TAB5 229 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 FOXJ1Q92949 421 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 FBXO32Q969P5 355 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 LRRC39Q96DD0 335 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 SPATA13Q96N96 652 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 VAT1Q99536 393 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 MKRN2Q9H000 416 aaKnown RBP14.04□□□□□ -0.16
HDAC6-215ENST00000465457 CATSPERBQ9H7T0 1116 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 CCSER2Q9H7U1 834 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 CNOT10Q9H9A5 744 aaKnown RBP14.04□□□□□ -0.16
HDAC6-215ENST00000465457 EIF2B3Q9NR50 452 aaKnown RBP14.04□□□□□ -0.16
HDAC6-215ENST00000465457 SPHK2Q9NRA0 654 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 RAB6BQ9NRW1 208 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 DNAJC17Q9NVM6 304 aaKnown RBP14.04□□□□□ -0.16
HDAC6-215ENST00000465457 WSB2Q9NYS7 404 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-215ENST00000465457 FETUBQ9UGM5 382 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 SLC12A6Q9UHW9 1150 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 EIF2B4Q9UI10 523 aaKnown RBP14.04□□□□□ -0.16
HDAC6-215ENST00000465457 DNMT3LQ9UJW3 386 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 STARD13Q9Y3M8 1113 aa14.04□□□□□ -0.16
HDAC6-215ENST00000465457 A0A1W2PQH9 124 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 E2F8A0AVK6 867 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 CBX4O00257 560 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 BCAT2O15382 392 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-215ENST00000465457 CDH16O75309 829 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 ACSL3O95573 720 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 APOEP02649 317 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 ERCC2P18074 760 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 CSNK1EP49674 416 aaKnown RBP14.03□□□□□ -0.16
HDAC6-215ENST00000465457 PGFP49763 221 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 IL9RQ01113 521 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 SEMG2Q02383 582 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 PDIA2Q13087 525 aaKnown RBP14.03□□□□□ -0.16
HDAC6-215ENST00000465457 RASA2Q15283 850 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 FUT11Q495W5 492 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 DNAJC21Q5F1R6 531 aaKnown RBP14.03□□□□□ -0.16
HDAC6-215ENST00000465457 GRAMD4Q6IC98 578 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 TAOK1Q7L7X3 1001 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 PRUNE1Q86TP1 453 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 LRRC49Q8IUZ0 686 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 OR2W6PQ8NHA6 318 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 KCNV2Q8TDN2 545 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 HDAC11Q96DB2 347 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 TBC1D31Q96DN5 1066 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 C1orf74Q96LT6 269 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 PPP1R2P1Q96PQ5 205 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 CENPHQ9H3R5 247 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 XAB2Q9HCS7 855 aaKnown RBP14.03□□□□□ -0.16
HDAC6-215ENST00000465457 ETNK2Q9NVF9 386 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 USP36Q9P275 1121 aaKnown RBP14.03□□□□□ -0.16
HDAC6-215ENST00000465457 TBC1D14Q9P2M4 693 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 SNX11Q9Y5W9 270 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 COL12A1Q99715 3063 aa14.03□□□□□ -0.16
HDAC6-215ENST00000465457 E7EVH7 732 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 LRIG2O94898 1065 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 SHBGP04278 402 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 GSTA2P09210 222 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 HLA-EP13747 358 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 EPHB2P29323 1055 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 PPIDQ08752 370 aaKnown RBP14.02□□□□□ -0.17
HDAC6-215ENST00000465457 GALNT2Q10471 571 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 SLC10A2Q12908 348 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-215ENST00000465457 SEMA5AQ13591 1074 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 KYNUQ16719 465 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 KIF19Q2TAC6 998 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 CCDC38Q502W7 563 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 ZBED8Q8IZ13 594 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 ATP6V0D2Q8N8Y2 350 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 PYROXD1Q8WU10 500 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 BHMTQ93088 406 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 TLCD1Q96CP7 247 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 CDC6Q99741 560 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 SEMA4CQ9C0C4 833 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 RETREG1Q9H6L5 497 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 LGALS13Q9UHV8 139 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 TRHDEQ9UKU6 1024 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 SH3BP1Q9Y3L3 701 aa14.02□□□□□ -0.17
HDAC6-215ENST00000465457 KCNU1A8MYU2 1149 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 RNF103O00237 685 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 CACNG3O60359 315 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 GREM1O60565 184 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 SHOX2O60902 331 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-215ENST00000465457 TMEM63AO94886 807 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 ZDHHC11BP0C7U3 371 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 MLNP12872 115 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 PPP3CCP48454 512 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 TPMTP51580 245 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 TBX4P57082 545 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 CFHR1Q03591 330 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 TRIP4Q15650 581 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-215ENST00000465457 KCTD19Q17RG1 926 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-215ENST00000465457 KLHL38Q2WGJ6 581 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 GLIPR1L2Q4G1C9 344 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 MANEALQ5VSG8 457 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 KCTD16Q68DU8 428 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 ITPRIPL1Q6GPH6 555 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 TPGS1Q6ZTW0 290 aa14.01□□□□□ -0.17
HDAC6-215ENST00000465457 TDRPQ86YL5 185 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms