RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 TADA1Q96BN2 335 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 IFT43Q96FT9 208 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 IMP4Q96G21 291 aaKnown RBP13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 PPP1R2P1Q96PQ5 205 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 RTKNQ9BST9 563 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 HEMGNQ9BXL5 484 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 DLL3Q9NYJ7 618 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 SAE1Q9UBE0 346 aaPredicted RBP13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 ANKRD6Q9Y2G4 727 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 JRKLQ9Y4A0 524 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 PCDHB9Q9Y5E1 797 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 PCDHGC4Q9Y5F7 938 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 PCDHGB2Q9Y5G2 931 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 RAI2Q9Y5P3 530 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
CUEDC2-202ENST00000465409 PI4KAP42356 2102 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CACNA1EQ15878 2313 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 TLR4O00206 839 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 PSMD11O00231 422 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CDX4O14627 284 aaPredicted RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 YKT6O15498 198 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 SPINT1O43278 529 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 PAK4O96013 591 aaPredicted RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 EPOP01588 193 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 HLA-DQB2P05538 268 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 PECAM1P16284 738 aaPredicted RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CTSKP43235 329 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CSNK1EP49674 416 aaKnown RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 C21orf59P57076 290 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 MAXP61244 160 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 YPEL5P62699 121 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 PPP2CBP62714 309 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 PPP2CAP67775 309 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CCDC6Q16204 474 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 STPG1Q5TH74 334 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 DPPA4Q7L190 304 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 ADAT2Q7Z6V5 191 aaKnown RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 ABI3BPQ7Z7G0 1075 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 NLRP8Q86W28 1048 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CDKL3Q8IVW4 592 aaPredicted RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 ACTL9Q8TC94 416 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 PIH1D2Q8WWB5 315 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 MAIP1Q8WWC4 291 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 CENPTQ96BT3 561 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 NSMCE3Q96MG7 304 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 QKIQ96PU8 341 aaKnown RBP eCLIP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 MCCC1Q96RQ3 725 aaPredicted RBP13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 LYSMD1Q96S90 227 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 EDEM2Q9BV94 578 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 ADGRE3Q9BY15 652 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 AASDHPPTQ9NRN7 309 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 ZKSCAN5Q9Y2L8 839 aa13.21□□□□□ -0.29
CUEDC2-202ENST00000465409 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 IGLON5A6NGN9 336 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 FPGTO14772 594 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 TM4SF5O14894 197 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 SLC31A1O15431 190 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 OPHN1O60890 802 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 STK10O94804 968 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 CPP00450 1065 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 RBP3P10745 1247 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 ZNF30P17039 623 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 PTPN3P26045 913 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 RABIFP47224 123 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 NIPAL4Q0D2K0 466 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 WASHC5Q12768 1159 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 TRAF2Q12933 501 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 GRIK2Q13002 908 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 ZBTB17Q13105 803 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 PUM1Q14671 1186 aaKnown RBP eCLIP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 SUZ12Q15022 739 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 ZNF423Q2M1K9 1284 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 USP45Q70EL2 814 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 ZC3H18Q86VM9 953 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 PAF1Q8N7H5 531 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 FCRL5Q96RD9 977 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 KLF6Q99612 283 aaPredicted RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 GLOD4Q9HC38 313 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 PCDH9Q9HC56 1237 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 GDF3Q9NR23 364 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 HOMER3Q9NSC5 361 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 CDV3Q9UKY7 258 aaKnown RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 CFAP54Q96N23 3096 aa13.2□□□□□ -0.3
CUEDC2-202ENST00000465409 LAMA1P25391 3075 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms