RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.04■□□□□ 0.32
ACTB-207ENST00000462494 TLR6Q9Y2C9 796 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 MYO16Q9Y6X6 1858 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 MT-CO1P00395 513 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 IGHA2P01877 340 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 TYMPP19971 482 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 CTGFP29279 349 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 PRAMEP78395 509 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 MS4A13Q5J8X5 152 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 MON1AQ86VX9 555 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 ZNF280BQ86YH2 543 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 CILP2Q8IUL8 1156 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 CCDC126Q96EE4 140 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 C1orf74Q96LT6 269 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 CENPKQ9BS16 269 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 ALG9Q9H6U8 611 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 ARNT2Q9HBZ2 717 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 CCDC167Q9P0B6 97 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 CRYL1Q9Y2S2 319 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 VWA7Q9Y334 891 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 KCTD3Q9Y597 815 aa17.03■□□□□ 0.32
ACTB-207ENST00000462494 ARHGEF37A1IGU5 675 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 WASH4PA8MWX3 477 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 UBDO15205 165 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 B4GALT3O60512 393 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 TBX18O95935 607 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 SLC4A1P02730 911 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 ASGR1P07306 291 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 HMBSP08397 361 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 RBP1P09455 135 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 ARSDP51689 593 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 CDKN2DP55273 166 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 USP46P62068 366 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 PDAP1Q13442 181 aaKnown RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 IHHQ14623 411 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 GPR158Q5T848 1215 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 ZFP1Q6P2D0 407 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 ISLR2Q6UXK2 745 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 MIB1Q86YT6 1006 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 NUP93Q8N1F7 819 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 UMODL1-AS1Q8N2C9 162 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 PELI3Q8N2H9 469 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 EXT2Q93063 718 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 BTBD9Q96Q07 612 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 GMIPQ9P107 970 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 UXTQ9UBK9 157 aaPredicted RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 PCDHB8Q9UN66 801 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 MTF2Q9Y483 593 aaPredicted RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 GPC4O75487 556 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 SNUPNO95149 360 aaKnown RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 MMP2P08253 660 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 RHOQP17081 205 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 HDCP19113 662 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 CHN2P52757 468 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 NDST2P52849 883 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 SATB1Q01826 763 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 NRG1Q02297 640 aaPredicted RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 ADGRE1Q14246 886 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 FASTKQ14296 549 aaKnown RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 RFTN1Q14699 578 aaPredicted RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 ACAP2Q15057 778 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 TLR1Q15399 786 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 LIN52Q52LA3 116 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 AGKQ53H12 422 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 SIRPB2Q5JXA9 342 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 CLEC6AQ6EIG7 209 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 PIM3Q86V86 326 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 CIR1Q86X95 450 aaPredicted RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 FAR2Q96K12 515 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 KLHL32Q96NJ5 620 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 ATP13A1Q9HD20 1204 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 MARCH4Q9P2E8 410 aaPredicted RBP17.02■□□□□ 0.32
ACTB-207ENST00000462494 SCML2Q9UQR0 700 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 NOD1Q9Y239 953 aa17.02■□□□□ 0.32
ACTB-207ENST00000462494 PATJQ8NI35 1801 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 GJB3O75712 270 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 BCAS2O75934 225 aaPredicted RBP17.01■□□□□ 0.31
ACTB-207ENST00000462494 SUPT7LO94864 414 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 SLC2A3P11169 496 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 CYBAP13498 195 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 PSME3P61289 254 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 RAP1GAP2Q684P5 730 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 TMEM207Q6UWW9 146 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 LILRA2Q8N149 483 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 RYBPQ8N488 228 aaPredicted RBP17.01■□□□□ 0.31
ACTB-207ENST00000462494 SH3RF2Q8TEC5 729 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 SLC39A13Q96H72 371 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 RANBP9Q96S59 729 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 PKP2Q99959 881 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 TRIM4Q9C037 500 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 MEAF6Q9HAF1 191 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 PRDM5Q9NQX1 630 aaPredicted RBP17.01■□□□□ 0.31
ACTB-207ENST00000462494 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 PRG3Q9Y2Y8 225 aaPredicted RBP17.01■□□□□ 0.31
ACTB-207ENST00000462494 C15orf38-AP3S2A0A0A6YYH1 394 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 ATP6AP2A0A1C7CYW4 349 aa17.01■□□□□ 0.31
ACTB-207ENST00000462494 MANSC4A6NHS7 340 aaPredicted RBP17.01■□□□□ 0.31
ACTB-207ENST00000462494 PSMD12O00232 456 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms