RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SLC41A1Q8IVJ1 513 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 CCDC89Q8N998 374 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 GLIS1Q8NBF1 620 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 LPCAT1Q8NF37 534 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 CADM4Q8NFZ8 388 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 ATL2Q8NHH9 583 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PIH1D2Q8WWB5 315 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 ZNF592Q92610 1267 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 TRIB3Q96RU7 358 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 MLPHQ9BV36 600 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PCDH12Q9NPG4 1184 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 GGT7Q9UJ14 662 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PHTF1Q9UMS5 762 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 METTL12A8MUP2 240 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 NEMP1O14524 444 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 TSPAN6O43657 245 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 RNGTTO60942 597 aaKnown RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 PCDH8O95206 1070 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 METTL18O95568 372 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 IGHV4-34P06331 123 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 ZSCAN5DPP0CG00 497 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 RPL22P35268 128 aaKnown RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 ACTN2P35609 894 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 MMP12P39900 470 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 PTGER3P43115 390 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 FNTAP49354 379 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 DHPSP49366 369 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 EPHB1P54762 984 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 GEMP55040 296 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 WNT3AP56704 352 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 RPL26P61254 145 aaKnown RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 FAM193AP78312 1265 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 SEMG2Q02383 582 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 LMNB2Q03252 620 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 LPAL2Q16609 132 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 KIAA0895LQ68EN5 471 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 ERAP2Q6P179 960 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 NEK5Q6P3R8 708 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 HORMAD1Q86X24 394 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 NDUFAF2Q8N183 169 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 IPMKQ8NFU5 416 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 FOXJ1Q92949 421 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 BIRC7Q96CA5 298 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 IFT43Q96FT9 208 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 SCRN2Q96FV2 425 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 MRGPRX2Q96LB1 330 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 HSPA12BQ96MM6 686 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 PPP1R2P1Q96PQ5 205 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 MCCC1Q96RQ3 725 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 DDX47Q9H0S4 455 aaKnown RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 PAK5Q9P286 719 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 RPL26L1Q9UNX3 145 aaKnown RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 SMG5Q9UPR3 1016 aaKnown RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 AAR2Q9Y312 384 aaKnown RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 PPIL1Q9Y3C6 166 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-221ENST00000462352 USP34Q70CQ2 3546 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 ABCA7Q8IZY2 2146 aa11.86□□□□□ -0.51
CPNE1-221ENST00000462352 A0A0J9YYE9 177 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 LOC285095A0A1B0GVY8 99 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 A0A1W2PQU0 124 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 MEI4A8MW99 385 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 URI1O94763 535 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-221ENST00000462352 FSBPO95073 299 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 TRBC1P01850 177 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 ALPIP09923 528 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 CTPS1P17812 591 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 NFKBIAP25963 317 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 FDFT1P37268 417 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 GRIA4P48058 902 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 CCR5P51681 352 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 GALNT3Q14435 633 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 PTPRRQ15256 657 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 QPCTQ16769 361 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 KCTD19Q17RG1 926 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-221ENST00000462352 TMEM52BQ4KMG9 183 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 FAXCQ5TGI0 409 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 LYSMD4Q5XG99 296 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 SEL1L3Q68CR1 1132 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 KIAA1161Q6NSJ0 714 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 USP45Q70EL2 814 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 DPPA4Q7L190 304 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 TRIM69Q86WT6 500 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 KLHDC8BQ8IXV7 354 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 SUMF1Q8NBK3 374 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 CXorf40AQ8TE69 158 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 GRK7Q8WTQ7 553 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 RMDN1Q96DB5 314 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 FEM1CQ96JP0 617 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 SMIM14Q96QK8 99 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 ADGRE3Q9BY15 652 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 SEMA4AQ9H3S1 761 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 B4GALT6Q9UBX8 382 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
CPNE1-221ENST00000462352 ZFR2Q9UPR6 939 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms