RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RANGRFQ9HD47 186 aaPredicted RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 PLSCR4Q9NRQ2 329 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 CPSF2Q9P2I0 782 aaKnown RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 C11orf21Q9P2W6 132 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 CNOT8Q9UFF9 292 aaKnown RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 LSM4Q9Y4Z0 139 aaKnown RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 CKAP5Q14008 2032 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 A0A1W2PQF6 199 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TSPY2A6NKD2 308 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 AKR1B15C9JRZ8 316 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 STMND1H3BQB6 276 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 PPP6CO00743 305 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 CTDSP2O14595 271 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 SCAMP1O15126 338 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 C1QL1O75973 258 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TOP3BO95985 862 aaKnown RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 MYZAPP0CAP1 466 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 PRR35P0CG20 571 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TSPY3P0CV98 308 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TSPY8P0CW00 308 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 CTSAP10619 480 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 ETFAP13804 333 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 SRD5A1P18405 259 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 ITGAXP20702 1163 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 ATP5F1P24539 256 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 TNFSF8P32971 234 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 RYKP34925 604 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 AVPR1AP37288 418 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 MFAP4P55083 255 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 CDH12P55289 794 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 IFI35P80217 286 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 TSPY1Q01534 308 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TFAP4Q01664 338 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 IKQ13123 557 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 BECN1Q14457 450 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 NTRK2Q16620 822 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TMEM266Q2M3C6 531 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 ALG11Q2TAA5 492 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 PLEKHO1Q53GL0 409 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 ESCO2Q56NI9 601 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 FAM133BQ5BKY9 247 aaKnown RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 BMP2KLQ5H9B9 411 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 RAB41Q5JT25 222 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 C6orf141Q5SZD1 244 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 HEPHL1Q6MZM0 1159 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 PCSK4Q6UW60 755 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 GLDNQ6ZMI3 551 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 ZNF66Q6ZN08 573 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 ZNF575Q86XF7 245 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 PARP16Q8N5Y8 322 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 POC5Q8NA72 575 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 PRSS3P2Q8NHM4 247 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 WIPF2Q8TF74 440 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 SGCDQ92629 289 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 FBXL8Q96CD0 374 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 CCDC34Q96HJ3 373 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 VCPIP1Q96JH7 1222 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 SIGLEC11Q96RL6 698 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TMEM47Q9BQJ4 181 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 WDR83Q9BRX9 315 aaKnown RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 TEX12Q9BXU0 123 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 PLEKHA4Q9H4M7 779 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 SLC28A3Q9HAS3 691 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 SPAG4Q9NPE6 437 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TMEM184CQ9NVA4 438 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 SUCLA2Q9P2R7 463 aaPredicted RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 NDRG3Q9UGV2 375 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 NENFQ9UMX5 172 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 R3HDM2Q9Y2K5 976 aaKnown RBP3.28□□□□□ -1.88
VCL-203ENST00000461383 MAU2Q9Y6X3 613 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 A3GALT2U3KPV4 340 aa3.28□□□□□ -1.88
VCL-203ENST00000461383 TRBV5-3A0A0A0MS03 114 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 FAM237AA0A1B0GTK4 181 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 SMIM35A0A1B0GVV1 85 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 KCNU1A8MYU2 1149 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 A8MZ25 164 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 H3BQ06 376 aaPredicted RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 IFNL4K9M1U5 179 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 TP73O15350 636 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 GPC4O75487 556 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 RGS11O94810 467 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 APOA4P06727 396 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 SRPRAP08240 638 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 CHRNB1P11230 501 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 CYP19A1P11511 503 aaPredicted RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 UBA7P41226 1012 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 SLC15A1P46059 708 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 NRIP1P48552 1158 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 CAMPP49913 170 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 RRP1P56182 461 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 ACSM2AQ08AH3 577 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 NAE1Q13564 534 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 IRF3Q14653 427 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 PSMD6Q15008 389 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 DCAF6Q58WW2 860 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 PIK3CD-AS1Q5SR53 167 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 ACSM2BQ68CK6 577 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 NAA16Q6N069 864 aaPredicted RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 SLC18B1Q6NT16 456 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 FBXO46Q6PJ61 603 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms