RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SKOR1P84550 965 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 TRAF2Q12933 501 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 ANKRD20A2Q5SQ80 823 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 SYCP2LQ5T4T6 812 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 ANKRD20A1Q5TYW2 823 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 ANKRD20A3Q5VUR7 823 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 KIAA0895LQ68EN5 471 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 ERAP2Q6P179 960 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 NDUFAF2Q8N183 169 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 FEM1CQ96JP0 617 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 SPATA13Q96N96 652 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 PPP1R2P1Q96PQ5 205 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 TMEM121Q9BTD3 319 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 EDEM2Q9BV94 578 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 C6orf106Q9H6K1 298 aaPredicted RBP22.63■■□□□ 1.21
C9orf3-209ENST00000460573 PHTF1Q9UMS5 762 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 ZNF148Q9UQR1 794 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 FADS3Q9Y5Q0 445 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 DCHS1Q96JQ0 3298 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 AREL1O15033 823 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 KHNYNO15037 678 aaKnown RBP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 FZD6O60353 706 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 GCATO75600 419 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 PGLSO95336 258 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 MMP2P08253 660 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 NFKB1P19838 968 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 CASQ1P31415 396 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 RPL26P61254 145 aaKnown RBP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 WDR45BQ5MNZ6 344 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 NYAP1Q6ZVC0 841 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 ARMCX6Q7L4S7 300 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 PRPF39Q86UA1 669 aaKnown RBP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 TRIM69Q86WT6 500 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 PDCD6IPQ8WUM4 868 aaKnown RBP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 PIGKQ92643 395 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 TADA1Q96BN2 335 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 RTP4Q96DX8 246 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 MS4A14Q96JA4 679 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 RBM15Q96T37 977 aaKnown RBP eCLIP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 TDRD1Q9BXT4 1180 aaKnown RBP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 GBA3Q9H227 469 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 RNF14Q9UBS8 474 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 FAM153AQ9UHL3 310 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 RSPH14Q9UHP6 348 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 RPL26L1Q9UNX3 145 aaKnown RBP22.62■■□□□ 1.21
C9orf3-209ENST00000460573 PCDHB9Q9Y5E1 797 aa22.62■■□□□ 1.21
C9orf3-209ENST00000460573 FAM47DPA6NHR8 397 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 C10orf142B7Z368 130 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 NEMP1O14524 444 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 CPP00450 1065 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 NUDT1P36639 197 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 ABL2P42684 1182 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 PLA2G2CQ5R387 149 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 STPG1Q5TH74 334 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 LYSMD4Q5XG99 296 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 TCEAL6Q6IPX3 200 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 KIAA1161Q6NSJ0 714 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 SLC41A1Q8IVJ1 513 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 FAM71DQ8N9W8 422 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 TCEAL3Q969E4 200 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 HSPA12BQ96MM6 686 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.61■■□□□ 1.21
C9orf3-209ENST00000460573 PPIL1Q9Y3C6 166 aa22.61■■□□□ 1.21
C9orf3-209ENST00000460573 GOLGA6L10A0A0M3HER8 536 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 MEI4A8MW99 385 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 RIOK3O14730 519 aaKnown RBP22.6■■□□□ 1.21
C9orf3-209ENST00000460573 ANXA9O76027 345 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 PCDH8O95206 1070 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 ACTN2P35609 894 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 LIMK1P53667 647 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 SNX1Q13596 522 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 PRPSAP1Q14558 356 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 IHHQ14623 411 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 P3H1Q32P28 736 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 TMEM52BQ4KMG9 183 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 SYT10Q6XYQ8 523 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 ARHGEF18Q6ZSZ5 1173 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 ZSWIM9Q86XI8 627 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 PRELID2Q8N945 189 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 ADGRE3Q9BY15 652 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 PCDH9Q9HC56 1237 aa22.6■■□□□ 1.21
C9orf3-209ENST00000460573 AAR2Q9Y312 384 aaKnown RBP22.6■■□□□ 1.21
C9orf3-209ENST00000460573 ZNF185O15231 689 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 RNGTTO60942 597 aaKnown RBP22.59■■□□□ 1.21
C9orf3-209ENST00000460573 FSBPO95073 299 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 HOXD12P35452 270 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 PTGER3P43115 390 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 EPHB1P54762 984 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 GEMP55040 296 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 RPS21P63220 83 aaKnown RBP22.59■■□□□ 1.21
C9orf3-209ENST00000460573 MPP3Q13368 585 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 HORMAD1Q86X24 394 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 DEFB119Q8N690 84 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 SPATA22Q8NHS9 363 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 CCDC110Q8TBZ0 833 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 PIH1D2Q8WWB5 315 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 DNASE2BQ8WZ79 361 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 BIRC7Q96CA5 298 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 PCDH12Q9NPG4 1184 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms