RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ZDHHC17Q8IUH5 632 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 FAM26EQ8N5C1 309 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 DCAF4L2Q8NA75 395 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 DENND6BQ8NEG7 585 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 USP7Q93009 1102 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TBATAQ96M53 351 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TMEM74Q96NL1 305 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 AGPAT1Q99943 283 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ISCUQ9H1K1 167 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 LRRN3Q9H3W5 708 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 HAUS4Q9H6D7 363 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 PCDHB11Q9Y5F2 797 aa11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 USP9YO00507 2555 aaPredicted RBP11.43□□□□□ -0.58
PRAMEF35P-201ENST00000458709 NOTCH2Q04721 2471 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SPTAN1Q13813 2472 aaKnown RBP11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 GOLGA6L6A8MZA4 724 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 THAP12O43422 761 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 PAGE1O75459 146 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 MAPK10P53779 464 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 KLHL30Q0D2K2 578 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 PTP4A2Q12974 167 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 KCNAB2Q13303 367 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 PTK2BQ14289 1009 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TCEAL1Q15170 157 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SLC18A3Q16572 532 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 CLEC16AQ2KHT3 1053 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 C5orf22Q49AR2 442 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 BORAQ6PGQ7 559 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 MACC1Q6ZN28 852 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 VPS36Q86VN1 386 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TMTC1Q8IUR5 882 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 DEFB106AQ8N104 65 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TMEM35BQ8NCS4 154 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 CCDC112Q8NEF3 446 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SLC20A1Q8WUM9 679 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 CENPTQ96BT3 561 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SLC12A9Q9BXP2 914 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SIK2Q9H0K1 926 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ZNHIT6Q9NWK9 470 aaKnown RBP11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 DOLKQ9UPQ8 538 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SNX10Q9Y5X0 201 aa11.42□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TCRBV5S1A1TA0A578 114 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 DDX3XO00571 662 aaKnown RBP eCLIP11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 NEMP1O14524 444 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TSPAN6O43657 245 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 GRAP2O75791 330 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 GLI1P08151 1106 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 MMEP08473 750 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 GKP32189 559 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 EIF4A3P38919 411 aaKnown RBP11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 DNA2P51530 1060 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 CCNHP51946 323 aaPredicted RBP11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SNX16P57768 344 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 PPARDQ03181 441 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ZFP36L1Q07352 338 aaKnown RBP11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 NME3Q13232 169 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 MON1BQ7L1V2 547 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TMPRSS9Q7Z410 1059 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TFAP2DQ7Z6R9 452 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ZSCAN30Q86W11 494 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 CCNJLQ8IV13 435 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 Q8N9G6 341 aaPredicted RBP11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 C1orf131Q8NDD1 294 aaKnown RBP11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 OR7D4Q8NG98 312 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 OR6K2Q8NGY2 324 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ASB12Q8WXK4 309 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SLC2A13Q96QE2 648 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 PCDHB18PQ96TA0 734 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 HEPHQ9BQS7 1158 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ZDHHC6Q9H6R6 413 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ANLNQ9NQW6 1124 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 MBNL1Q9NR56 388 aaKnown RBP11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TMEM51Q9NW97 253 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ASNSD1Q9NWL6 643 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 INTUQ9ULD6 942 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 GPR34Q9UPC5 381 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 PLAAQ9Y263 795 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ACTL7AQ9Y615 435 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 NBASA2RRP1 2371 aa11.41□□□□□ -0.58
PRAMEF35P-201ENST00000458709 A0A087X0T9 212 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 I6L893 689 aaPredicted RBP11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 M0QYT0 321 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 FAM228BP0C875 321 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 USP8P40818 1118 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SERPINH1P50454 418 aaKnown RBP11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 HK3P52790 923 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ELOCQ15369 112 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ALG11Q2TAA5 492 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 LRRC73Q5JTD7 316 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 OTUD1Q5VV17 481 aaPredicted RBP11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 ZNF662Q6ZS27 426 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SETD3Q86TU7 594 aaPredicted RBP11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 HID1Q8IV36 788 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 SFTPA2Q8IWL1 248 aa11.4□□□□□ -0.58
PRAMEF35P-201ENST00000458709 LRRC8AQ8IWT6 810 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms