RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CDR2Q01850 454 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 MTM1Q13496 603 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 C1orf61Q13536 156 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 AGERQ15109 404 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 IRF4Q15306 451 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CDO1Q16878 200 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 KLHL40Q2TBA0 621 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CCDC14Q49A88 953 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CT47A1Q5JQC4 288 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 EFHC2Q5JST6 749 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 TPRG1LQ5T0D9 272 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 ARTNQ5T4W7 220 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 ATXN7L2Q5T6C5 722 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 TRNP1Q6NT89 227 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 BRAT1Q6PJG6 821 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CRTC1Q6UUV9 634 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 SLFN11Q7Z7L1 901 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 DNAAF5Q86Y56 855 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 JAMLQ86YT9 394 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 HID1Q8IV36 788 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 RTL3Q8N8U3 475 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 TP53I13Q8NBR0 393 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 PCDH19Q8TAB3 1148 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 EPS8L1Q8TE68 723 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 RXFP2Q8WXD0 754 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CENPIQ92674 756 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 SGF29Q96ES7 293 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 ZNF641Q96N77 438 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 TUBGCP5Q96RT8 1024 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CMKLR1Q99788 373 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 ARHGAP9Q9BRR9 750 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 NAA15Q9BXJ9 866 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 B3GNT4Q9C0J1 378 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 TCEAL2Q9H3H9 227 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 LRRN3Q9H3W5 708 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 EPB41L5Q9HCM4 733 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 KLQ9UEF7 1012 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 PCDHB11Q9Y5F2 797 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 FHOD1Q9Y613 1164 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 DGKBQ9Y6T7 804 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 TSPAN11A1L157 253 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 C2CD4BA6NLJ0 364 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CACNB4O00305 520 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 TNFRSF10CO14798 259 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 FGF10O15520 208 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 GADD45BO75293 160 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CYP1A1P04798 512 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 RPLP0P05388 317 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CALB1P05937 261 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 MMEP08473 750 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 KRT3P12035 628 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 TIMP2P16035 220 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 GLB1P16278 677 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 NFKBIAP25963 317 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 EPHB2P29323 1055 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 GKP32189 559 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 UGT1A5P35504 534 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 NSFP46459 744 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CSRP3P50461 194 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 PDX1P52945 283 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 GSCP56915 257 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 POLR2LP62875 67 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 PEX6Q13608 980 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 SYCP1Q15431 976 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CAMK4Q16566 473 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CLPPQ16740 277 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 UGP2Q16851 508 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 ALG11Q2TAA5 492 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 MIIPQ5JXC2 388 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 KIAA1614Q5VZ46 1190 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 ENPP7Q6UWV6 458 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CCNJLQ8IV13 435 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 EMC1Q8N766 993 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 KYQ8NBH2 561 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 KIAA1524Q8TCG1 905 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 FAM172AQ8WUF8 416 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 HMCESQ96FZ2 354 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 WDR92Q96MX6 357 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 RBM15Q96T37 977 aaKnown RBP eCLIP8.09□□□□□ -1.119e-7■■■■□ 19.6
NIF3L1-209ENST00000454952 WRAP53Q9BUR4 548 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 APOOQ9BUR5 198 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 SELENOOQ9BVL4 669 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 SEMA4CQ9C0C4 833 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 CLPBQ9H078 707 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 MBNL1Q9NR56 388 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 NDFIP2Q9NV92 336 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 KCTD5Q9NXV2 234 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 SIRPGQ9P1W8 387 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 UBA2Q9UBT2 640 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 APPL1Q9UKG1 709 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 ACTL7AQ9Y615 435 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 ANKRD36A6QL64 1941 aa8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 ARHGEF17Q96PE2 2063 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-209ENST00000454952 A0A1W2PQC6 194 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms