RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMARCD2-204ENST00000450364 TRABD2BA6NFA1 517 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 SCAMP1O15126 338 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 HTRA2O43464 458 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 PROSCO94903 275 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 ARL4AP40617 200 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 SCNN1BP51168 640 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 ADKP55263 362 aaKnown RBP13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 CDH6P55285 790 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 MAXP61244 160 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 TBX2Q13207 712 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 AGERQ15109 404 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 FAM182AQ5T1J6 154 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 HES3Q5TGS1 186 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 TMCO4Q5TGY1 634 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 TMPRSS12Q86WS5 348 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 GALNT15Q8N3T1 639 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 PQLC3Q8N755 202 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 OR8K1Q8NGG5 319 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 RFFLQ8WZ73 363 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 APOLD1Q96LR9 279 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 ZNF599Q96NL3 588 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 SMIM14Q96QK8 99 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 MGME1Q9BQP7 344 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 CLPBQ9H078 707 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 NOD2Q9HC29 1040 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 ABHD10Q9NUJ1 306 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 SPTLC3Q9NUV7 552 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 NLGN3Q9NZ94 848 aa13.79□□□□□ -0.2
SMARCD2-204ENST00000450364 A0A0U1RQS6 177 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 MYO1FO00160 1098 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 MFAP3LO75121 409 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 MAP3K6O95382 1288 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 C1SP09871 688 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 CKMT1AP12532 417 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 JUNDP17535 347 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 SERPINA4P29622 427 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 SUOXP51687 545 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 ELP6Q0PNE2 266 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 SLC10A2Q12908 348 aaPredicted RBP13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 TRAF2Q12933 501 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 GRM3Q14832 879 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 LIPIQ6XZB0 460 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 DPPA4Q7L190 304 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 TEX26Q8N6G2 289 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 FAM181AQ8N9Y4 354 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 FAF2Q96CS3 445 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 LRRC61Q9BV99 259 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 ATP13A3Q9H7F0 1226 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 SEPT3Q9UH03 358 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 PCDHGC4Q9Y5F7 938 aa13.78□□□□□ -0.2
SMARCD2-204ENST00000450364 ANKRD11Q6UB99 2663 aaPredicted RBP13.77□□□□□ -0.2
SMARCD2-204ENST00000450364 SSU72P8A0A1W2PR75 194 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 C3orf70A6NLC5 250 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 A8MX80 341 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 AQP9O43315 295 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 TMEM253P0C7T8 217 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 GJC1P36383 396 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 AP1S1P61966 158 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 HNRNPKP61978 463 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 YPEL5P62699 121 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 BCL2L1Q07817 233 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 GALNT2Q10471 571 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 BPTFQ12830 3046 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 TARDBPQ13148 414 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 ILKQ13418 452 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 C1orf61Q13536 156 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 INPP5AQ14642 412 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 LRRC14Q15048 493 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 PAFAH1B3Q15102 231 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 ALG11Q2TAA5 492 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 ANKRD20A8PQ5CZ79 823 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 MACC1Q6ZN28 852 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 PHACTR4Q8IZ21 702 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 CBARPQ8N350 705 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 LMX1AQ8TE12 382 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 RAPGEF5Q92565 580 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 CCDC86Q9H6F5 360 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 RCOR3Q9P2K3 495 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 UVRAGQ9P2Y5 699 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 DKK4Q9UBT3 224 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 B4GALT6Q9UBX8 382 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 OR1A2Q9Y585 309 aa13.77□□□□□ -0.21
SMARCD2-204ENST00000450364 GOLGA4Q13439 2230 aaKnown RBP13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 RECQL5O94762 991 aaPredicted RBP13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 PCCBP05166 539 aa13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 H2AFZP0C0S5 128 aa13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 LHCGRP22888 699 aa13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 XPAP23025 273 aaPredicted RBP13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 GBE1Q04446 702 aa13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 TRIM14Q14142 442 aa13.76□□□□□ -0.21
SMARCD2-204ENST00000450364 KRT81Q14533 505 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms