RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 METTL7BQ6UX53 244 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 SZRD1Q7Z422 152 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 LINC00523Q86TU6 105 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 TTC30AQ86WT1 665 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 C8orf59Q8N0T1 100 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-204ENST00000449510 FEM1AQ9BSK4 669 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 KATNAL1Q9BW62 490 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 IL22Q9GZX6 179 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 EPB41L1Q9H4G0 881 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 KIAA1257Q9ULG3 409 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 OR51F1A6NGY5 319 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 TMEM114B3SHH9 223 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 TMX2-CTNND1H3BSU7 103 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 PLOD2O00469 737 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 GCATO75600 419 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 ANXA9O76027 345 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 FTH1P02794 183 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 SLC2A4P14672 509 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 HALP42357 657 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 RPS9P46781 194 aaKnown RBP12.47□□□□□ -0.41
UBE3B-204ENST00000449510 LAPTM4AQ15012 233 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 OGFRL1Q5TC84 451 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-204ENST00000449510 XRRA1Q6P2D8 792 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 SH3GL1Q99961 368 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 SLC2A6Q9UGQ3 507 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 KNL1Q8NG31 2342 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 PMM2O15305 246 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 ASNA1O43681 348 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 SNNO75324 88 aaPredicted RBP12.46□□□□□ -0.41
UBE3B-204ENST00000449510 TPSB2P20231 275 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 FMO4P31512 558 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 GJA8P48165 433 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 ADAM17P78536 824 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 LAPTM5Q13571 262 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 TPSAB1Q15661 275 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 CMPK2Q5EBM0 449 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 SYPL2Q5VXT5 272 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 CES4AQ5XG92 561 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 RNF111Q6ZNA4 994 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 GCNT7Q6ZNI0 430 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 CLHC1Q8NHS4 586 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 CERKQ8TCT0 537 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 B3GALT6Q96L58 329 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 RHOJQ9H4E5 214 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 OLA1Q9NTK5 396 aaKnown RBP12.46□□□□□ -0.41
UBE3B-204ENST00000449510 OXSMQ9NWU1 459 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 AAR2Q9Y312 384 aaKnown RBP12.46□□□□□ -0.41
UBE3B-204ENST00000449510 C7orf72A4D263 438 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 PSMD11O00231 422 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 SOCS2O14508 198 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 CNOT3O75175 753 aaKnown RBP12.46□□□□□ -0.41
UBE3B-204ENST00000449510 B3GAT3O94766 335 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 SNAP29O95721 258 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 AHSGP02765 367 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 TAF6P49848 677 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 SNAPC2Q13487 334 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 SQLEQ14534 574 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 TGFBIQ15582 683 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 FAM98BQ52LJ0 330 aaKnown RBP12.46□□□□□ -0.41
UBE3B-204ENST00000449510 WSCD1Q658N2 575 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 METTL6Q8TCB7 284 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 MCRS1Q96EZ8 462 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 HAPLN3Q96S86 360 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 SORT1Q99523 831 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 TMEM134Q9H6X4 195 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 NSMCE4AQ9NXX6 385 aa12.46□□□□□ -0.41
UBE3B-204ENST00000449510 DDX43Q9NXZ2 648 aaKnown RBP12.46□□□□□ -0.41
UBE3B-204ENST00000449510 CASTOR2A6NHX0 329 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 BCAS2O75934 225 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-204ENST00000449510 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-204ENST00000449510 EDN1P05305 212 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 PRKACGP22612 351 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 LRRC74AQ0VAA2 488 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 INSCQ1MX18 579 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 RAVER1Q8IY67 606 aaKnown RBP12.46□□□□□ -0.42
UBE3B-204ENST00000449510 TTC39CQ8N584 583 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 NIPA2Q8N8Q9 360 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 UTP15Q8TED0 518 aaKnown RBP12.46□□□□□ -0.42
UBE3B-204ENST00000449510 FAR2Q96K12 515 aa12.46□□□□□ -0.42
UBE3B-204ENST00000449510 SMPD3Q9NY59 655 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-204ENST00000449510 GPC6Q9Y625 555 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-204ENST00000449510 BTN3A1O00481 513 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 RAD51BO15315 384 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 MSCO60682 206 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 CYP7B1O75881 506 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 RECQL4O94761 1208 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 GSNP06396 782 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 ARL2P36404 184 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 RHDQ02161 417 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 INAQ16352 499 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 LCLAT1Q6UWP7 414 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 CCDC80Q76M96 950 aa12.45□□□□□ -0.42
UBE3B-204ENST00000449510 PIWIL3Q7Z3Z3 882 aaKnown RBP12.45□□□□□ -0.42
UBE3B-204ENST00000449510 METTL23Q86XA0 190 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms