RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 EIF1ADQ8N9N8 165 aaKnown RBP11.78□□□□□ -0.52
FN1-212ENST00000446046 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 ITFG1Q8TB96 612 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 CERS2Q96G23 380 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 SPATA9Q9BWV2 254 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 HDHD2Q9H0R4 259 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 CDT1Q9H211 546 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 SNX13Q9Y5W8 968 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 KNL1Q8NG31 2342 aa11.78□□□□□ -0.52
FN1-212ENST00000446046 TRAFD1O14545 582 aaPredicted RBP11.77□□□□□ -0.52
FN1-212ENST00000446046 PSMB4P28070 264 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 KAT5Q92993 513 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 CAVIN3Q969G5 261 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 CLIP3Q96DZ5 547 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 PRICKLE1Q96MT3 831 aaPredicted RBP11.77□□□□□ -0.52
FN1-212ENST00000446046 TRPM6Q9BX84 2022 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 A0A0G2JLL6 359 aaPredicted RBP11.77□□□□□ -0.52
FN1-212ENST00000446046 ARF4P18085 180 aaPredicted RBP11.77□□□□□ -0.52
FN1-212ENST00000446046 SLC6A2P23975 617 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 CDH5P33151 784 aaPredicted RBP11.77□□□□□ -0.52
FN1-212ENST00000446046 PRRT2Q7Z6L0 340 aaPredicted RBP11.77□□□□□ -0.52
FN1-212ENST00000446046 WFIKKN2Q8TEU8 576 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 DLG3Q92796 817 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 RHBGQ9H310 441 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 PDP2Q9P2J9 529 aa11.77□□□□□ -0.52
FN1-212ENST00000446046 CORO1CQ9ULV4 474 aaPredicted RBP11.77□□□□□ -0.52
FN1-212ENST00000446046 EFCAB10A6NFE3 127 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 IFNGP01579 166 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 CCDC166P0CW27 439 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 CCNA2P20248 432 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 CMPK1P30085 196 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 DPYSL3Q14195 570 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 TRAF7Q6Q0C0 670 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 ZBTB49Q6ZSB9 765 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 RASAL3Q86YV0 1011 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 TTC29Q8NA56 475 aaPredicted RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 MTRRQ9UBK8 725 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 KLQ9UEF7 1012 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 ETS1P14921 441 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 MBTD1Q05BQ5 628 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 MARK2Q7KZI7 788 aaKnown RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 SMYD1Q8NB12 490 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 TMEM161BQ8NDZ6 487 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 OR4L1Q8NH43 312 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 SMCHD1A6NHR9 2005 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 A8MX80 341 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 PRG2P13727 222 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 EPS8L3Q8TE67 593 aaKnown RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 TEFMQ96QE5 360 aaKnown RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 IL12RB2Q99665 862 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 BCL2L14Q9BZR8 327 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 ECM29Q5VYK3 1845 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 HNRNPCP07910 306 aaKnown RBP eCLIP11.77□□□□□ -0.531e-6■■□□□ 14.2
FN1-212ENST00000446046 MAMLD1Q13495 774 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 TBCELQ5QJ74 424 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 TREML2Q5T2D2 321 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 KIAA0408Q6ZU52 694 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 OTOP3Q7RTS5 596 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 HDDC2Q7Z4H3 204 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 STYXQ8WUJ0 223 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 MYO19Q96H55 970 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 BTBD9Q96Q07 612 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 EML1O00423 815 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 RASGRP1O95267 797 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 MAPKAPK3Q16644 382 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 PDE12Q6L8Q7 609 aaKnown RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 CAPN13Q6MZZ7 669 aaPredicted RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 PIGZQ86VD9 579 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 DNAAF5Q86Y56 855 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 RAVER1Q8IY67 606 aaKnown RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 OR10G6Q8NH81 332 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 HERVK_113Q902F9 699 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 LPPQ93052 612 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 SLC4A5Q9BY07 1137 aa11.77□□□□□ -0.53
FN1-212ENST00000446046 IRX2Q9BZI1 471 aaPredicted RBP11.77□□□□□ -0.53
FN1-212ENST00000446046 COL3A1P02461 1466 aaPredicted RBP11.76□□□□□ -0.53
FN1-212ENST00000446046 CCNYL3P0C7X3 344 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 CORO1AP31146 461 aaKnown RBP11.76□□□□□ -0.53
FN1-212ENST00000446046 YBEYP58557 167 aaPredicted RBP11.76□□□□□ -0.53
FN1-212ENST00000446046 SLC25A24Q6NUK1 477 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 ZNF605Q86T29 641 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 OR14C36Q8NHC7 312 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 MAML3Q96JK9 1138 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 DNAAF2Q9NVR5 837 aaKnown RBP11.76□□□□□ -0.53
FN1-212ENST00000446046 ABHD14A-ACY1A0A1B0GW23 586 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 TAF4O00268 1085 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 AP3D1O14617 1153 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 NFKB1P19838 968 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 CRATP43155 626 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 GSTM5P46439 218 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 CXCR3P49682 368 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 IL5RAQ01344 420 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 LDLRAP1Q5SW96 308 aa11.76□□□□□ -0.53
FN1-212ENST00000446046 TAPT1Q6NXT6 567 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms