RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ZSWIM9Q86XI8 627 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 MCUQ8NE86 351 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 FBXL12Q9NXK8 326 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 MUC3AQ02505 3323 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 SMAPO00193 183 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 RNASEH2AO75792 299 aaKnown RBP17.52■□□□□ 0.39
SGCE-206ENST00000445866 TMEM63AO94886 807 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 ATXN1LP0C7T5 689 aaKnown RBP17.52■□□□□ 0.39
SGCE-206ENST00000445866 CTPS1P17812 591 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 HLA-DPA1P20036 260 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 CCR3P51677 355 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 CCDC15Q0P6D6 951 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 CNTN1Q12860 1018 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 QPCTQ16769 361 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 PARS2Q7L3T8 475 aaKnown RBP17.52■□□□□ 0.39
SGCE-206ENST00000445866 BMP8AQ7Z5Y6 402 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 ART4Q93070 314 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 COL25A1Q9BXS0 654 aaPredicted RBP17.52■□□□□ 0.39
SGCE-206ENST00000445866 HDAC8Q9BY41 377 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 PABPC3Q9H361 631 aaKnown RBP17.52■□□□□ 0.39
SGCE-206ENST00000445866 ARNT2Q9HBZ2 717 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 GDF3Q9NR23 364 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 SCML1Q9UN30 329 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 NCKAP1Q9Y2A7 1128 aa17.52■□□□□ 0.39
SGCE-206ENST00000445866 A0A1W2PP55 124 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 BHMG1C9JSJ3 638 aaPredicted RBP17.51■□□□□ 0.39
SGCE-206ENST00000445866 AVILO75366 819 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 APBB3O95704 486 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 PRKCGP05129 697 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 P2RY2P41231 377 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 ABL2P42684 1182 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 PXNP49023 591 aaPredicted RBP17.51■□□□□ 0.39
SGCE-206ENST00000445866 CARSP49589 748 aaKnown RBP17.51■□□□□ 0.39
SGCE-206ENST00000445866 FAM193AP78312 1265 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 CAV1Q03135 178 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 CDH17Q12864 832 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 PTPRRQ15256 657 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 LRRC73Q5JTD7 316 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 LRRC8BQ6P9F7 803 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 FBXL6Q8N531 539 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 CAMKK1Q8N5S9 505 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 AADATQ8N5Z0 425 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 SMIM14Q96QK8 99 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 NEUROG2Q9H2A3 272 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 CASS4Q9NQ75 786 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 SHOC2Q9UQ13 582 aa17.51■□□□□ 0.39
SGCE-206ENST00000445866 TSPAN11A1L157 253 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 A8MX80 341 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 UPK3BL1B0FP48 263 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 UPK3BL2E5RIL1 263 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 AP3B1O00203 1094 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 TP73O15350 636 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 FGF1P05230 155 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 PIRTP0C851 137 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 HNF1BP35680 557 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 NEK3P51956 506 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 SESN2P58004 480 aaPredicted RBP17.5■□□□□ 0.39
SGCE-206ENST00000445866 MTM1Q13496 603 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 HLTFQ14527 1009 aaKnown RBP eCLIP17.5■□□□□ 0.39
SGCE-206ENST00000445866 TTC31Q49AM3 519 aaPredicted RBP17.5■□□□□ 0.39
SGCE-206ENST00000445866 DENND2CQ68D51 928 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 CAND1Q86VP6 1230 aaKnown RBP17.5■□□□□ 0.39
SGCE-206ENST00000445866 TMEM105Q8N8V8 129 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 SCRN2Q96FV2 425 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 PWWP2AQ96N64 755 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 XAB2Q9HCS7 855 aaKnown RBP17.5■□□□□ 0.39
SGCE-206ENST00000445866 PCDH12Q9NPG4 1184 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 ITM2CQ9NQX7 267 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 EBF1Q9UH73 591 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 PPIL1Q9Y3C6 166 aa17.5■□□□□ 0.39
SGCE-206ENST00000445866 NYNRINQ9P2P1 1898 aaKnown RBP17.5■□□□□ 0.39
SGCE-206ENST00000445866 A0A0J9YYE9 177 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 NEMP1O14524 444 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 TRBC1P01850 177 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 ALPIP09923 528 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 ADRB3P13945 408 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 NFKBIAP25963 317 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 DRD3P35462 400 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 GRIA4P48058 902 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 NPY2RP49146 381 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 SEMG2Q02383 582 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 CUL1Q13616 776 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 CERCAMQ5T4B2 595 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 ERAP2Q6P179 960 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 USP45Q70EL2 814 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 FAM124AQ86V42 546 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 MDGA1Q8NFP4 955 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 FBXO25Q8TCJ0 367 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 SERPINB12Q96P63 405 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 FRMD8Q9BZ67 464 aaPredicted RBP17.49■□□□□ 0.39
SGCE-206ENST00000445866 ANKZF1Q9H8Y5 726 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 BFARQ9NZS9 450 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 SERGEFQ9UGK8 458 aa17.49■□□□□ 0.39
SGCE-206ENST00000445866 LAMTOR5O43504 91 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 C7P10643 843 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 MLNP12872 115 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 TPMTP51580 245 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 SUOXP51687 545 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 NAA30Q147X3 362 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms