RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 LRRC57Q8N9N7 239 aa21.99■■□□□ 1.11
TRAF4-205ENST00000444415 TP53I13Q8NBR0 393 aaPredicted RBP21.99■■□□□ 1.11
TRAF4-205ENST00000444415 SAP25Q8TEE9 199 aa21.99■■□□□ 1.11
TRAF4-205ENST00000444415 KLHDC7BQ96G42 594 aa21.99■■□□□ 1.11
TRAF4-205ENST00000444415 HERPUD2Q9BSE4 406 aa21.99■■□□□ 1.11
TRAF4-205ENST00000444415 LUC7LQ9NQ29 371 aaKnown RBP21.99■■□□□ 1.11
TRAF4-205ENST00000444415 SCUBE2Q9NQ36 999 aa21.99■■□□□ 1.11
TRAF4-205ENST00000444415 MBNL1Q9NR56 388 aaKnown RBP21.99■■□□□ 1.11
TRAF4-205ENST00000444415 HEY1Q9Y5J3 304 aa21.99■■□□□ 1.11
TRAF4-205ENST00000444415 HS3ST3A1Q9Y663 406 aa21.99■■□□□ 1.11
TRAF4-205ENST00000444415 COL5A1P20908 1838 aaPredicted RBP21.98■■□□□ 1.11
TRAF4-205ENST00000444415 GRID2IPA4D2P6 1211 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 SOCS5O75159 536 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 C6P13671 934 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 EPHA8P29322 1005 aaPredicted RBP21.98■■□□□ 1.11
TRAF4-205ENST00000444415 RXRGP48443 463 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 DYNLT1P63172 113 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 ELP6Q0PNE2 266 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 BNIP3Q12983 259 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 PTPRRQ15256 657 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 TIGD7Q6NT04 549 aaPredicted RBP21.98■■□□□ 1.11
TRAF4-205ENST00000444415 DAAM2Q86T65 1068 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 RFX6Q8HWS3 928 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 CNTD1Q8N815 330 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 ARRDC2Q8TBH0 407 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 CXorf40AQ8TE69 158 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 SKA1Q96BD8 255 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 SAE1Q9UBE0 346 aaPredicted RBP21.98■■□□□ 1.11
TRAF4-205ENST00000444415 WASF3Q9UPY6 502 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 CEP295Q9C0D2 2601 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 AKAP13Q12802 2813 aa21.98■■□□□ 1.11
TRAF4-205ENST00000444415 LRP4O75096 1905 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.97■■□□□ 1.11
TRAF4-205ENST00000444415 KCNK1O00180 336 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 TM7SF2O76062 418 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 CCNB1P14635 433 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 PECAM1P16284 738 aaPredicted RBP21.97■■□□□ 1.11
TRAF4-205ENST00000444415 MX2P20592 715 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 PFN3P60673 137 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 DSC2Q02487 901 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 NIPAL4Q0D2K0 466 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 Q6ZSR6 202 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 B4GALNT4Q76KP1 1039 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 CCDC13Q8IYE1 715 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 DENND6BQ8NEG7 585 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 NSMCE1Q8WV22 266 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 IL12RB2Q99665 862 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 SEMA3CQ99985 751 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 ANP32EQ9BTT0 268 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 SLC32A1Q9H598 525 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 RBM22Q9NW64 420 aaKnown RBP eCLIP21.97■■□□□ 1.115e-9■■■■□ 21.3
TRAF4-205ENST00000444415 PNMA8BQ9ULN7 279 aaPredicted RBP21.97■■□□□ 1.11
TRAF4-205ENST00000444415 CHD8Q9HCK8 2581 aa21.97■■□□□ 1.11
TRAF4-205ENST00000444415 hCG_1818297A0A087WSY0 165 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 A6NNZ2 444 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 FLRT2O43155 660 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 FZD6O60353 706 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 DFNA5O60443 496 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 PDHA1P08559 390 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 PMLP29590 882 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 CTNNA1P35221 906 aaKnown RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 LIG3P49916 1009 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 SGCGQ13326 291 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 RALGPS1Q5JS13 557 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 CFAP58Q5T655 872 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 PTAR1Q7Z6K3 402 aaPredicted RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 BBS5Q8N3I7 341 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 SMIM14Q96QK8 99 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 POLR1EQ9GZS1 481 aaKnown RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 FREM2Q5SZK8 3169 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 PGLSO95336 258 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 IPO7O95373 1038 aaKnown RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 MMP2P08253 660 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 XPAP23025 273 aaPredicted RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 IFI35P80217 286 aaPredicted RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 IRF4Q15306 451 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 WSCD2Q2TBF2 565 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 LIPIQ6XZB0 460 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 DPPA4Q7L190 304 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 CCNYQ8ND76 341 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 SETD7Q8WTS6 366 aaKnown RBP21.96■■□□□ 1.11
TRAF4-205ENST00000444415 CEP41Q9BYV8 373 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 TOR4AQ9NXH8 423 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 B4GALT6Q9UBX8 382 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 PCDHB9Q9Y5E1 797 aa21.96■■□□□ 1.11
TRAF4-205ENST00000444415 TPRP12270 2363 aaKnown RBP21.95■■□□□ 1.1
TRAF4-205ENST00000444415 CST8O60676 142 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 MAGEC1O60732 1142 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 TOP3BO95985 862 aaKnown RBP21.95■■□□□ 1.1
TRAF4-205ENST00000444415 JCHAINP01591 159 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 LHCGRP22888 699 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 PEX5P50542 639 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 SIM1P81133 766 aaPredicted RBP21.95■■□□□ 1.1
TRAF4-205ENST00000444415 FZD2Q14332 565 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 AGERQ15109 404 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 TFDP3Q5H9I0 405 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 KAZNQ674X7 775 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 ERAP2Q6P179 960 aa21.95■■□□□ 1.1
TRAF4-205ENST00000444415 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms