RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 ITGADQ13349 1161 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 SF3B4Q15427 424 aaKnown RBP eCLIP4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 GPR68Q15743 365 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 KIF19Q2TAC6 998 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 FAM69BQ5VUD6 431 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 SPSB3Q6PJ21 355 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 RHBDF2Q6PJF5 856 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 NOXA1Q86UR1 476 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 NR2C2APQ86WQ0 139 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 ZNF114Q8NC26 417 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 C11orf65Q8NCR3 313 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 IGSF21Q96ID5 467 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 MPHOSPH8Q99549 860 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 FUZQ9BT04 418 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 MMTAG2Q9BU76 263 aaKnown RBP4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 SMYD2Q9NRG4 433 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 C20orf141Q9NUB4 165 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 HCN3Q9P1Z3 774 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 SLC25A10Q9UBX3 287 aaPredicted RBP4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 MALT1Q9UDY8 824 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 TBX20Q9UMR3 447 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 NFS1Q9Y697 457 aa4.45□□□□□ -1.7
AC003001.1-201ENST00000443247 TEX13CA0A0J9YWL9 993 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 A0A1B0GUV1 79 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 DENND3A2RUS2 1198 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 IFITM10A6NMD0 228 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 TNPO2O14787 897 aaKnown RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 WNT9BO14905 357 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 SLC16A5O15375 505 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 BCAT2O15382 392 aaPredicted RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 ZIC3O60481 467 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 EIF3JO75822 258 aaKnown RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 AFPP02771 609 aaKnown RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 HEXAP06865 529 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 CHATP28329 748 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 ERVFC1-1P60608 527 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 RPP30P78346 268 aaKnown RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 GRIK3Q13003 919 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 SNTA1Q13424 505 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 SETMARQ53H47 684 aaPredicted RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 RRM2BQ7LG56 351 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 ZC3HC1Q86WB0 502 aaKnown RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 MTBPQ96DY7 904 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 SCMH1Q96GD3 660 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 OR1F2PQ96R84 312 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 RETREG1Q9H6L5 497 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 GAREM1Q9H706 876 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 DDX31Q9H8H2 851 aaKnown RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 NOX4Q9NPH5 578 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 DDX4Q9NQI0 724 aaKnown RBP4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 SLC9A2Q9UBY0 812 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 CDC14AQ9UNH5 594 aa4.44□□□□□ -1.7
AC003001.1-201ENST00000443247 LOC102724159A0A0B4J2E5 919 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 HOXC11O43248 304 aaPredicted RBP4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 ETFAP13804 333 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 UFM1P61960 85 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 DLG1Q12959 904 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 CAMK1Q14012 370 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 PPP2R5BQ15173 497 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 PWP2Q15269 919 aaKnown RBP4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 EFNB3Q15768 340 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 CALCRLQ16602 461 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 MMEL1Q495T6 779 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 NAA35Q5VZE5 725 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 TDRPQ86YL5 185 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 DHX40Q8IX18 779 aaKnown RBP4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 ZCCHC10Q8TBK6 192 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 HTRA1Q92743 480 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 FBXL8Q96CD0 374 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 HVCN1Q96D96 273 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 KIF1BPQ96EK5 621 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 APOPT1Q96IL0 206 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 DUX5Q96PT3 197 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 ZNF556Q9HAH1 456 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 FAM96BQ9Y3D0 163 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 NFE2L3Q9Y4A8 694 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 SNX9Q9Y5X1 595 aa4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 LRRFIP2Q9Y608 721 aaKnown RBP4.43□□□□□ -1.7
AC003001.1-201ENST00000443247 ABCC9O60706 1549 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 CPED1A4D0V7 1026 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 NPIPB11E5RHQ5 1161 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 IFNL4K9M1U5 179 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 TSPAN4O14817 238 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 MT-CYBP00156 380 aaPredicted RBP4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 PYGLP06737 847 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 CD58P19256 250 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 HNRNPH1P31943 449 aaKnown RBP4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 TMEM95Q3KNT9 176 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 SMAP1Q8IYB5 467 aaPredicted RBP4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 SCCPDHQ8NBX0 429 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 CREB3L4Q8TEY5 395 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 KLHL15Q96M94 604 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 CSF3RQ99062 836 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 BPIFA1Q9NP55 256 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 SLCO3A1Q9UIG8 710 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 CCDC180Q9P1Z9 1646 aa4.42□□□□□ -1.7
AC003001.1-201ENST00000443247 SCN5AQ14524 2016 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 SAA2-SAA4A0A096LPE2 208 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms