RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 C8orf33Q9H7E9 229 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 MANSC1Q9H8J5 431 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SP110Q9HB58 689 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 INTS7Q9NVH2 962 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 ING3Q9NXR8 418 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RBPJLQ9UBG7 517 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 KCNJ14Q9UNX9 436 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MAPRE3Q9UPY8 281 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 BAIAP2Q9UQB8 552 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 WBP11Q9Y2W2 641 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 PPP2R3BQ9Y5P8 575 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CORINQ9Y5Q5 1042 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MYH2Q9UKX2 1941 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 C2CD3Q4AC94 2353 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 DOPEY2Q9Y3R5 2298 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RNF103-CHMP3A0A140T963 221 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FAM237AA0A1B0GTK4 181 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PRSS47A8MTI9 375 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 E5RI56 91 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CXCL11O14625 94 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TOR1AO14656 332 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PJA2O43164 708 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ZBTB43O43298 467 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RSL1D1O76021 490 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 PROCP04070 461 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CHRM5P08912 532 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 ALOX12P18054 663 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NCF2P19878 526 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 AXLP30530 894 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 HOXC13P31276 330 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ATP5OP48047 213 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TRAPPC10P48553 1259 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NDST2P52849 883 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ACLYP53396 1101 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 GALK2Q01415 458 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ABRQ12979 859 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PPIGQ13427 754 aaKnown RBP eCLIP2.8□□□□□ -1.96
LIG4-203ENST00000442234 GPM6BQ13491 265 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MOGSQ13724 837 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 COTL1Q14019 142 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 BAATQ14032 418 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 CDK10Q15131 360 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PFKFB3Q16875 520 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 FBXO43Q4G163 708 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ESCO2Q56NI9 601 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 HES5Q5TA89 166 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SYCE2Q6PIF2 218 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ATG9AQ7Z3C6 839 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ZNF354CQ86Y25 554 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RNF135Q8IUD6 432 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CRLF3Q8IUI8 442 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ARID3BQ8IVW6 561 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 ARHGEF19Q8IW93 802 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LNX2Q8N448 690 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CPSF7Q8N684 471 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 TMEM35BQ8NCS4 154 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 OR8H1Q8NGG4 311 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 DENND1AQ8TEH3 1009 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CYGBQ8WWM9 190 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NELL1Q92832 810 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TUBGCP3Q96CW5 907 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MAGED4Q96JG8 741 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FAM167AQ96KS9 214 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SNX18Q96RF0 628 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 C1QTNF1Q9BXJ1 281 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ING2Q9H160 280 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 OSGEPL1Q9H4B0 414 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CHST12Q9NRB3 414 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PCDHB16Q9NRJ7 776 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.8□□□□□ -1.96
LIG4-203ENST00000442234 EHD3Q9NZN3 535 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MBD2Q9UBB5 411 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 KLQ9UEF7 1012 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ENOPH1Q9UHY7 261 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SNX6Q9UNH7 406 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RPH3AQ9Y2J0 694 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 TRAF6Q9Y4K3 522 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SRPRBQ9Y5M8 271 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 SESN1Q9Y6P5 492 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ABCA4P78363 2273 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FMN2Q9NZ56 1722 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RGPD5Q99666 1765 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CENPEQ02224 2701 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 A0A1W2PQ45 241 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 A0A1W2PQY0 241 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FAM92AA1XBS5 289 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 C2orf71A6NGG8 1288 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SAGE2PA6NJ88 616 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 H3BMQ9 156 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RNF103O00237 685 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RTCAO00442 366 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 SHOXO15266 292 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TBX1O43435 398 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SGCEO43556 437 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 AKAP10O43572 662 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PSTPIP1O43586 416 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CALUO43852 315 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 SEC24AO95486 1093 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 IL33O95760 270 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PDGFAP04085 211 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms