RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ZBTB17Q13105 803 aa20.42■□□□□ 0.86
SHOX2-203ENST00000441443 CTBP1Q13363 440 aa20.42■□□□□ 0.86
SHOX2-203ENST00000441443 PKDCCQ504Y2 493 aa20.42■□□□□ 0.86
SHOX2-203ENST00000441443 PRRT2Q7Z6L0 340 aaPredicted RBP20.42■□□□□ 0.86
SHOX2-203ENST00000441443 RNF139Q8WU17 664 aa20.42■□□□□ 0.86
SHOX2-203ENST00000441443 CENPIQ92674 756 aaPredicted RBP20.42■□□□□ 0.86
SHOX2-203ENST00000441443 FTHL17Q9BXU8 183 aa20.42■□□□□ 0.86
SHOX2-203ENST00000441443 KIAA1522Q9P206 1035 aaPredicted RBP20.42■□□□□ 0.86
SHOX2-203ENST00000441443 KRBA1A5PL33 1030 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 ESRRBO95718 433 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 BCL10O95999 233 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 ZNF354CQ86Y25 554 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 DENND6AQ8IWF6 608 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 TRUB1Q8WWH5 349 aaKnown RBP20.41■□□□□ 0.86
SHOX2-203ENST00000441443 SGIP1Q9BQI5 828 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 CCDC68Q9H2F9 335 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 TCAF1Q9Y4C2 921 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 ZBTB24O43167 697 aaPredicted RBP20.41■□□□□ 0.86
SHOX2-203ENST00000441443 ATICP31939 592 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 MPP1Q00013 466 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 KCNC4Q03721 635 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 IL31Q6EBC2 164 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 ANKRD13AQ8IZ07 590 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 SEPT8Q92599 483 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 AGPAT4Q9NRZ5 378 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 NME7Q9Y5B8 376 aa20.41■□□□□ 0.86
SHOX2-203ENST00000441443 MT-ND1P03886 318 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 NR4A1P22736 598 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 FASP25445 335 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 PTPN3P26045 913 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 CD151P48509 253 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 POU5F1BQ06416 359 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 AMHR2Q16671 573 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 FAM35AQ86V20 835 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 RETREG3Q86VR2 466 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 RNF135Q8IUD6 432 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 MAGEE2Q8TD90 523 aaPredicted RBP20.4■□□□□ 0.86
SHOX2-203ENST00000441443 GPR78Q96P69 363 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 SLC25A23Q9BV35 468 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 MAF1Q9H063 256 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 FZD8Q9H461 694 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 RHOJQ9H4E5 214 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 SMARCAD1Q9H4L7 1026 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 FANCEQ9HB96 536 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 SACM1LQ9NTJ5 587 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 SPATA7Q9P0W8 599 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 GPC6Q9Y625 555 aaPredicted RBP20.4■□□□□ 0.86
SHOX2-203ENST00000441443 NME4O00746 187 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 OXSR1O95747 527 aaPredicted RBP20.4■□□□□ 0.86
SHOX2-203ENST00000441443 TSPAN8P19075 237 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 ADORA2BP29275 332 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 SLC10A6Q3KNW5 377 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 MFSD6LQ8IWD5 586 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 PACRGLQ8N7B6 248 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 C2orf40Q9H1Z8 148 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 CASS4Q9NQ75 786 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 RIC8BQ9NVN3 520 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 GTF2IRD1Q9UHL9 959 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 DAPK2Q9UIK4 370 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 FZD10Q9ULW2 581 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 TMED5Q9Y3A6 229 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 NCAM1P13591 858 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 IL10P22301 178 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 KCNA5P22460 613 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 CSRP3P50461 194 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 BFSP2Q13515 415 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 PERM1Q5SV97 790 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 SNX29P2Q8IUI4 249 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 DHRSXQ8N5I4 330 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 CASP10Q92851 521 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 CDCA5Q96FF9 252 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 C9orf16Q9BUW7 83 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 KIAA1257Q9ULG3 409 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 TANC1Q9C0D5 1861 aa20.4■□□□□ 0.86
SHOX2-203ENST00000441443 SNAP29O95721 258 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 GJA9P57773 515 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 SEPT6Q14141 434 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 CAPRIN1Q14444 709 aaKnown RBP20.39■□□□□ 0.85
SHOX2-203ENST00000441443 TTLL4Q14679 1199 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 TMEM132DQ14C87 1099 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 SLC26A9Q7LBE3 791 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 TMCO5AQ8N6Q1 288 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 HDAC10Q969S8 669 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 FAM149B1Q96BN6 582 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 ITPKCQ96DU7 683 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 MLPHQ9BV36 600 aaPredicted RBP20.39■□□□□ 0.85
SHOX2-203ENST00000441443 ADAMTS10Q9H324 1103 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 DPEP3Q9H4B8 488 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 NANOGQ9H9S0 305 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 IFT80Q9P2H3 777 aaPredicted RBP20.39■□□□□ 0.85
SHOX2-203ENST00000441443 ST14Q9Y5Y6 855 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 ACOX3O15254 700 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 JAK1P23458 1154 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 ELK4P28324 431 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 ATP6AP1Q15904 470 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 CLEC6AQ6EIG7 209 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 FAM45BPQ6NSW5 357 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 SLC7A5P1Q8MH63 180 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 TERB1Q8NA31 727 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 FAM45AQ8TCE6 357 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms