RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SLC22A18ASQ8N1D0 253 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 ZNF548Q8NEK5 533 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 TMIEQ8NEW7 156 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 RNF34Q969K3 372 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 CCDC47Q96A33 483 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 EEF2KMTQ96G04 330 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 PAGE5Q96GU1 130 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 LIN37Q96GY3 246 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 CCDC114Q96M63 670 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 IL12RB2Q99665 862 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 DYRK4Q9NR20 520 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 GPR27Q9NS67 375 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 USP25Q9UHP3 1055 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 SLC12A6Q9UHW9 1150 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 COQ4Q9Y3A0 265 aa8.59□□□□□ -1.03
NIF3L1-208ENST00000436412 TCAF2A6NFQ2 919 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 PLD2O14939 933 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 AQP9O43315 295 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 PPFIA2O75334 1257 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 NEBLO76041 1014 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 PCDH8O95206 1070 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 MOCS2O96007 188 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 FYNP06241 537 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 SLC2A3P11169 496 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 GP1BBP13224 206 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 MYF5P13349 255 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 KRT10P13645 584 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 RABIFP47224 123 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 ME1P48163 572 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 RGS7P49802 495 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 MTA1Q13330 715 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 FZD2Q14332 565 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 RABGAP1LQ5R372 815 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 RAP1GAP2Q684P5 730 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 GUSBP11Q6P575 273 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 KYAT3Q6YP21 454 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 GCNT7Q6ZNI0 430 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 PTAR1Q7Z6K3 402 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 C14orf80Q86SX3 495 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 GUF1Q8N442 669 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 ATP6V0D2Q8N8Y2 350 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 BTN2A2Q8WVV5 523 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 ARRDC3Q96B67 414 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 MYOCQ99972 504 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 FEM1AQ9BSK4 669 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 HDAC8Q9BY41 377 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 CBX8Q9HC52 389 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 SEPT10Q9P0V9 454 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 IPO11Q9UI26 975 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 PCDHA7Q9UN72 937 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 HS3ST2Q9Y278 367 aa8.58□□□□□ -1.04
NIF3L1-208ENST00000436412 COL27A1Q8IZC6 1860 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 KCNU1A8MYU2 1149 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 KPNA3O00505 521 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 RHOBTB3O94955 611 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 CD8BP10966 210 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 EPB41P11171 864 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 SLC5A2P31639 672 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 CHRNA3P32297 505 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 RPL34P49207 117 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 CLDN2P57739 230 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 RPS21P63220 83 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 SERINC3Q13530 473 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 SPIDRQ14159 915 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 EDRF1Q3B7T1 1238 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 ZNF542PQ5EBM4 170 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 ATL3Q6DD88 541 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 CXorf57Q6NSI4 855 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 KIAA1161Q6NSJ0 714 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 ERN2Q76MJ5 926 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 TAC4Q86UU9 113 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 SH2D3CQ8N5H7 860 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 UBR7Q8N806 425 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 KLK6Q92876 244 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 EXTL1Q92935 676 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 FAM149B1Q96BN6 582 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 ALG14Q96F25 216 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 PPP1R16AQ96I34 528 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 FEM1CQ96JP0 617 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 BMFQ96LC9 184 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 TBATAQ96M53 351 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 NOX5Q96PH1 765 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 PRMT1Q99873 361 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 BOCQ9BWV1 1114 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 CEP44Q9C0F1 390 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 STRADBQ9C0K7 418 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 FZD3Q9NPG1 666 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 GEMIN8Q9NWZ8 242 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 SPASTQ9UBP0 616 aa8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 XPO7Q9UIA9 1087 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-208ENST00000436412 LMO7DNF2Z398 122 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 M0QYV0 167 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 NTN3O00634 580 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 MUSKO15146 869 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 CETN3O15182 167 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 NVLO15381 856 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 NOBOXO60393 691 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms