RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 NAA16Q6N069 864 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 TRAPPC11Q7Z392 1133 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 SLC35F5Q8WV83 523 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 PERPQ96FX8 193 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 SORCS2Q96PQ0 1159 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 SLITRK1Q96PX8 696 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 GFM1Q96RP9 751 aaKnown RBP4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 KRTAP17-1Q9BYP8 105 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 PLEKHA4Q9H4M7 779 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 MAGEE1Q9HCI5 957 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 PDGFCQ9NRA1 345 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 GIMAP4Q9NUV9 329 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 SUCLA2Q9P2R7 463 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 ERVK-11Q9UQG0 969 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 ADAM18Q9Y3Q7 739 aa4.7□□□□□ -1.66
HMGB1P45-201ENST00000435986 LOC100509620A0A075B734 347 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 TRBV5-3A0A0A0MS03 114 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 A0A1W2PQ09 198 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 A8MZ25 164 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 KLRF2D3W0D1 207 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 NPIPB11E5RHQ5 1161 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 SNAP23O00161 211 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 P4HA2O15460 535 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 HCRTR2O43614 444 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 NDUFB4O95168 129 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 WNT1P04628 370 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 ETFAP13804 333 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 CHATP28329 748 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 TNFSF8P32971 234 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 AVPR1AP37288 418 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 CLCN5P51795 746 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 F2RL1P55085 397 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 RRP1P56182 461 aaKnown RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 CLDN2P57739 230 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 ACSM2AQ08AH3 577 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 NEDD9Q14511 834 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 SMTNL2Q2TAL5 461 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 PIK3CD-AS1Q5SR53 167 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 ACSM2BQ68CK6 577 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 SLC30A6Q6NXT4 461 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 ZNF782Q6ZMW2 699 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 PATL1Q86TB9 770 aaKnown RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 EPHX4Q8IUS5 362 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 RNF168Q8IYW5 571 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 POC5Q8NA72 575 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 POMGNT2Q8NAT1 580 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 SCCPDHQ8NBX0 429 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 MCUQ8NE86 351 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 BEST2Q8NFU1 509 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 MPLKIPQ8TAP9 179 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 CHFRQ96EP1 664 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 TMEM47Q9BQJ4 181 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 TRMOQ9BU70 441 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 MXD3Q9BW11 206 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 IFIH1Q9BYX4 1025 aaKnown RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 POLR1BQ9H9Y6 1135 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 SCPEP1Q9HB40 452 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 RANGRFQ9HD47 186 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 SPAG4Q9NPE6 437 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 FZD3Q9NPG1 666 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 PLSCR4Q9NRQ2 329 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 DECR2Q9NUI1 292 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 PLK2Q9NYY3 685 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 CPSF2Q9P2I0 782 aaKnown RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 PLEKHB1Q9UF11 243 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 PAM16Q9Y3D7 125 aa4.69□□□□□ -1.66
HMGB1P45-201ENST00000435986 FAM237AA0A1B0GTK4 181 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 HSPB2A8KAH6 182 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 CDRT15L2A8MXV6 281 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 STMND1H3BQB6 276 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 DAB1O75553 588 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 C1QL1O75973 258 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 NKX2-2O95096 273 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 SRPRAP08240 638 aaKnown RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 MMP2P08253 660 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 CBSLP0DN79 551 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 NR2F1P10589 423 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 SRD5A1P18405 259 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 GPTP24298 496 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 CBSP35520 551 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 PTH2RP49190 550 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 ALDH7A1P49419 539 aaKnown RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 GALCP54803 685 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 CAPSQ13938 189 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 LPIN1Q14693 890 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 TRIP6Q15654 476 aaKnown RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 HSPB2Q16082 182 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 CEP78Q5JTW2 689 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 PRAMEF19Q5SWL8 479 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 LCTLQ6UWM7 567 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 ADGRG3Q86Y34 549 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 DHX40Q8IX18 779 aaKnown RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 RBFAQ8N0V3 343 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 CEP76Q8TAP6 659 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 TMEM163Q8TC26 289 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 NSMCE1Q8WV22 266 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 WDFY2Q96P53 400 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 MMTAG2Q9BU76 263 aaKnown RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 OSGEPL1Q9H4B0 414 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 OGFRQ9NZT2 677 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms