RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 FAM72BQ86X60 149 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 SFR1Q86XK3 245 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 OR13A1Q8NGR1 328 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 HSPH1Q92598 858 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 SDCCAG3Q96C92 435 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 TMEM19Q96HH6 336 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 CLSTN3Q9BQT9 956 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 ENTPD7Q9NQZ7 604 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 C1RLQ9NZP8 487 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 KCNS2Q9ULS6 477 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 A0A0U1RQF3 1178 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 ABHD14A-ACY1A0A1B0GW23 586 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 IPO5O00410 1097 aaKnown RBP3.72□□□□□ -1.81
PTPN4-205ENST00000433888 SOCS6O14544 535 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 TIPRLO75663 272 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 CSTBP04080 98 aaKnown RBP3.72□□□□□ -1.81
PTPN4-205ENST00000433888 CETPP11597 493 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 HLA-DOBP13765 273 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 SLC20A2Q08357 652 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 ATP13A5Q4VNC0 1218 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 ESCO2Q56NI9 601 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 SLC26A9Q7LBE3 791 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 MYPOPQ86VE0 399 aaPredicted RBP3.72□□□□□ -1.81
PTPN4-205ENST00000433888 SPEM1Q8N4L4 309 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 ZNF485Q8NCK3 441 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 DNAAF1Q8NEP3 725 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 GOLGA1Q92805 767 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 ERGIC1Q969X5 290 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 TTC12Q9H892 705 aaPredicted RBP3.72□□□□□ -1.81
PTPN4-205ENST00000433888 IFT80Q9P2H3 777 aaPredicted RBP3.72□□□□□ -1.81
PTPN4-205ENST00000433888 CDC14AQ9UNH5 594 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 NFE2L3Q9Y4A8 694 aa3.72□□□□□ -1.81
PTPN4-205ENST00000433888 ATXN2Q99700 1313 aaKnown RBP3.71□□□□□ -1.81
PTPN4-205ENST00000433888 SERINC4A6NH21 518 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 KLRF2D3W0D1 207 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 RFPL2O75678 378 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 ZNF883P0CG24 379 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 NR0B1P51843 470 aaKnown RBP3.71□□□□□ -1.82
PTPN4-205ENST00000433888 CUL4BQ13620 913 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 PPP6R3Q5H9R7 873 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-205ENST00000433888 FAM83BQ5T0W9 1011 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 JMJD6Q6NYC1 403 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-205ENST00000433888 DENND1BQ6P3S1 775 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 FAM122CQ6P4D5 195 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 CHD1LQ86WJ1 897 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 GDPD5Q8WTR4 605 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 CRB3Q9BUF7 120 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 RBM4Q9BWF3 364 aaKnown RBP3.71□□□□□ -1.82
PTPN4-205ENST00000433888 CHODLQ9H9P2 273 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 GRHPRQ9UBQ7 328 aa3.71□□□□□ -1.82
PTPN4-205ENST00000433888 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 ASPDHA6ND91 283 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 PLRG1O43660 514 aaKnown RBP3.7□□□□□ -1.82
PTPN4-205ENST00000433888 ATP2C2O75185 946 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 TBX6O95947 436 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-205ENST00000433888 CHRM4P08173 479 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 RELQ04864 619 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-205ENST00000433888 TMEM30BQ3MIR4 351 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 IL20RBQ6UXL0 311 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 SLC9B2Q86UD5 537 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 NFE4Q86UQ8 179 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 CHERPQ8IWX8 916 aaKnown RBP3.7□□□□□ -1.82
PTPN4-205ENST00000433888 RBM17Q96I25 401 aaKnown RBP3.7□□□□□ -1.82
PTPN4-205ENST00000433888 CSTL1Q9H114 145 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 DDX43Q9NXZ2 648 aaKnown RBP3.7□□□□□ -1.82
PTPN4-205ENST00000433888 PSAT1Q9Y617 370 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 A3GALT2U3KPV4 340 aa3.7□□□□□ -1.82
PTPN4-205ENST00000433888 PDS5AQ29RF7 1337 aaKnown RBP3.7□□□□□ -1.82
PTPN4-205ENST00000433888 HSPB2A8KAH6 182 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 PRC1O43663 620 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 NDUFB4O95168 129 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 CDH1P12830 882 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 VEGFAP15692 232 aaPredicted RBP3.69□□□□□ -1.82
PTPN4-205ENST00000433888 STX2P32856 288 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 HTR3AP46098 478 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 HDAC4P56524 1084 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 HSPB2Q16082 182 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 ARHGAP17Q68EM7 881 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 GFRALQ6UXV0 394 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 B3GNT6Q6ZMB0 384 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 LURAP1LQ8IV03 231 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 FOXRED2Q8IWF2 684 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 PARP16Q8N5Y8 322 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 DBF4BQ8NFT6 615 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 FAM76AQ8TAV0 307 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 TAS1R2Q8TE23 839 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 ALG14Q96F25 216 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 TWNKQ96RR1 684 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 CHMP4AQ9BY43 222 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 LMAN2LQ9H0V9 348 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 PCDH9Q9HC56 1237 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 TMEM30AQ9NV96 361 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 KIAA1210Q9ULL0 1709 aa3.69□□□□□ -1.82
PTPN4-205ENST00000433888 TYW5A2RUC4 315 aaKnown RBP3.68□□□□□ -1.82
PTPN4-205ENST00000433888 LILRA5A6NI73 299 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 STX16-NPEPL1H3BU86 382 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 STX16O14662 325 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 KLK8O60259 260 aa3.68□□□□□ -1.82
PTPN4-205ENST00000433888 ZNF8P17098 575 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms