RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 DEPDC1Q5TB30 811 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CUZD1Q86UP6 607 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 RETREG3Q86VR2 466 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 ANKRD13AQ8IZ07 590 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 AFAP1L2Q8N4X5 818 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 OR6B3Q8NGW1 331 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 RDH11Q8TC12 318 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CDT1Q9H211 546 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PTPRHQ9HD43 1115 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 AGPAT4Q9NRZ5 378 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 MTF2Q9Y483 593 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 SPATA31C2B4DYI2 1134 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PSMD11O00231 422 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 ANGPT2O15123 496 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 S100BP04271 92 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CYBRD1Q53TN4 286 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PAGE2BQ5JRK9 111 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CCNYL2Q5T2Q4 361 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 TMTC4Q5T4D3 741 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PELI3Q8N2H9 469 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 HEXDCQ8WVB3 486 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 SH3YL1Q96HL8 342 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 NSMCE3Q96MG7 304 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 TRIM15Q9C019 465 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 DNAI2Q9GZS0 605 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PALMDQ9NP74 551 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 MRPL42Q9Y6G3 142 aaKnown RBP11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 A0A0J9YYE9 177 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 TRIM64CA6NLI5 447 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 HACD1B0YJ81 288 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 GABBR2O75899 941 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 SUPT7LO94864 414 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PGK1P00558 417 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PCNAP12004 261 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 IL7RP16871 459 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 KCNA5P22460 613 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 S100A1P23297 94 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 SULT1E1P49888 294 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PITX1P78337 314 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 DNAJC14Q6Y2X3 702 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PRR23BQ6ZRT6 265 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ARMCX6Q7L4S7 300 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 CLEC4FQ8N1N0 589 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 SFRP1Q8N474 314 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 OR13F1Q8NGS4 319 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RNF139Q8WU17 664 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ISL2Q96A47 359 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RNF145Q96MT1 663 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ZMAT2Q96NC0 199 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 SEZ6LQ9BYH1 1024 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 EIF2B3Q9NR50 452 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 DSEQ9UL01 958 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PTGDR2Q9Y5Y4 395 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 FAM95CA0A1B0GW59 222 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 HLCSP50747 726 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PRKAA2P54646 552 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 TMBIM6P55061 237 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 CDH13P55290 713 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RPS3AP61247 264 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ZNF846Q147U1 533 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 OXA1LQ15070 435 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ATP6AP1Q15904 470 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PHKG1Q16816 387 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 BROXQ5VW32 411 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 FRA10AC1Q70Z53 315 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 SLCO6A1Q86UG4 719 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PACRGLQ8N7B6 248 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ZNF280CQ8ND82 737 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 GPR22Q99680 433 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 OLFM1Q99784 485 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 MINDY3Q9H8M7 445 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 HMG20AQ9NP66 347 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 LTB4R2Q9NPC1 389 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ANKRD6Q9Y2G4 727 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 TRAF6Q9Y4K3 522 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 MAGED1Q9Y5V3 778 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ANKRD12Q6UB98 2062 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 COL16A1Q07092 1604 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 DPYSL4O14531 572 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 HUS1O60921 280 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RASAL1O95294 804 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 CCT8P50990 548 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 CLCN3P51790 818 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 PLA2G16P53816 162 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RAB10P61026 200 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 CLCQ05315 142 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 IQSEC1Q6DN90 963 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 XRRA1Q6P2D8 792 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 TBPL2Q6SJ96 375 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RAB2BQ8WUD1 216 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 LPAR1Q92633 364 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 MAELQ96JY0 434 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 ZNF347Q96SE7 839 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 MRPL45Q9BRJ2 306 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 GBA3Q9H227 469 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 RHOJQ9H4E5 214 aa11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 NOL6Q9H6R4 1146 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-202ENST00000433297 SLX4Q8IY92 1834 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms