RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TSHRP16473 764 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 AMPD1P23109 780 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 HTR7P34969 479 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 EIF2S3P41091 472 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 LIG3P49916 1009 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 FANCCQ00597 558 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 COL9A2Q14055 689 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 DPYSL2Q16555 572 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 FIGNQ5HY92 759 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 EFL1Q7Z2Z2 1120 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 SRLQ86TD4 932 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 DCP2Q8IU60 420 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 PCDH19Q8TAB3 1148 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 PTCD2Q8WV60 388 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 TSACCQ96A04 125 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 CSPG4P5Q96PW8 444 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 NRSN2Q9GZP1 204 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 NAT10Q9H0A0 1025 aaKnown RBP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 ZWILCHQ9H900 591 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 FGF22Q9HCT0 170 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDAC4-202ENST00000430200 ATP8A1Q9Y2Q0 1164 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 RAI2Q9Y5P3 530 aa11.87□□□□□ -0.51
HDAC4-202ENST00000430200 BSNQ9UPA5 3926 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 TMEM202A6NGA9 273 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 ARHGAP42A6NI28 874 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 A8MX80 341 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 MFSD11O43934 449 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 PRPSAP2O60256 369 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 LZTS3O60299 673 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-202ENST00000430200 RARAP10276 462 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 CR2P20023 1033 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 LHCGRP22888 699 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 THOP1P52888 689 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 ADKP55263 362 aaKnown RBP11.86□□□□□ -0.51
HDAC4-202ENST00000430200 TRAF2Q12933 501 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 MMRN1Q13201 1228 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 INPP5AQ14642 412 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 NFATC4Q14934 902 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
HDAC4-202ENST00000430200 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 POLNQ7Z5Q5 900 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 FAM174AQ8TBP5 190 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 OR1E3Q8WZA6 343 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 HSPH1Q92598 858 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 CINPQ9BW66 212 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-202ENST00000430200 SP110Q9HB58 689 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 PCDH18Q9HCL0 1135 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 ASCL3Q9NQ33 180 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
HDAC4-202ENST00000430200 IPO11Q9UI26 975 aaKnown RBP11.86□□□□□ -0.51
HDAC4-202ENST00000430200 AK5Q9Y6K8 562 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 CSNK1G3Q9Y6M4 447 aa11.86□□□□□ -0.51
HDAC4-202ENST00000430200 CPED1A4D0V7 1026 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 EME2A4GXA9 379 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-202ENST00000430200 SMTNL1A8MU46 457 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 LMO7DNF2Z398 122 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 H3BM21 787 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 YY2O15391 372 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 MAFKO60675 156 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 PALMO75781 387 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 MAP3K6O95382 1288 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 SERPINC1P01008 464 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 GP1BAP07359 652 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 CCDC172P0C7W6 258 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 ALPPL2P10696 532 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 CDK4P11802 303 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 IL4RP24394 825 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 PCK1P35558 622 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 CSNK1DP48730 415 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 MAXP61244 160 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 GABREP78334 506 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 IL10RBQ08334 325 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 ELP6Q0PNE2 266 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 LRRC14Q15048 493 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 AGERQ15109 404 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 CNGA3Q16281 694 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 TBC1D25Q3MII6 688 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 BRAT1Q6PJG6 821 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 LIPIQ6XZB0 460 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 DPPA4Q7L190 304 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 B3GNT8Q7Z7M8 397 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 CACTIN-AS1Q8N1I8 211 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 MAPK15Q8TD08 544 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 LRRN4Q8WUT4 740 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 ATXN7L3BQ96GX2 97 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 PRR11Q96HE9 360 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-202ENST00000430200 HIC2Q96JB3 615 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 ZNF641Q96N77 438 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-202ENST00000430200 PSKH2Q96QS6 385 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 TUBGCP5Q96RT8 1024 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 LGR4Q9BXB1 951 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 PACSIN1Q9BY11 444 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 B4GALT6Q9UBX8 382 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 ENTPD2Q9Y5L3 495 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 SCINQ9Y6U3 715 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 PIEZO2Q9H5I5 2752 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms