RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ATG14Q6ZNE5 492 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 SLC45A3Q96JT2 553 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 FCRL2Q96LA5 508 aaPredicted RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 NPY6RQ99463 290 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 SIKE1Q9BRV8 207 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 GBA3Q9H227 469 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PRKAG2Q9UGJ0 569 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 DICER1Q9UPY3 1922 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CABYRO75952 493 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CRTAMO95727 393 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 APOA4P06727 396 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CES1P23141 567 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CRABP2P29373 138 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 MS4A2Q01362 244 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 STX5Q13190 355 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 TLR1Q15399 786 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 PFKFB4Q16877 469 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 INSCQ1MX18 579 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 PCID2Q5JVF3 399 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 GPR158Q5T848 1215 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 IL23RQ5VWK5 629 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CIR1Q86X95 450 aaPredicted RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 CEP97Q8IW35 865 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 C7orf61Q8IZ16 206 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CRYBG2Q8N1P7 616 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 TMCO5AQ8N6Q1 288 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 RPRD1AQ96P16 312 aaPredicted RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 MID1IP1Q9NPA3 183 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CRTAC1Q9NQ79 661 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 OXSMQ9NWU1 459 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 GJD2Q9UKL4 321 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 BLOC1S6Q9UL45 172 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 AP4S1Q9Y587 144 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 COPG1Q9Y678 874 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 HEATR9A2RTY3 570 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 PAGE1O75459 146 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 SNAI1O95863 264 aaPredicted RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 THPOP40225 353 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 GLUD2P49448 558 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 PSEN2P49810 448 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 GEMP55040 296 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CSE1LP55060 971 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 CDH15P55291 814 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 WNT3AP56704 352 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 ESRRGP62508 458 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 CEACAM7Q14002 265 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 ZNF235Q14590 738 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 FAM187BQ17R55 369 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 DUSP28Q4G0W2 176 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 OTUD3Q5T2D3 398 aaPredicted RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 TIFABQ6ZNK6 161 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 ZC3HC1Q86WB0 502 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 RP9Q8TA86 221 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 DNAJB14Q8TBM8 379 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 DQX1Q8TE96 717 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 NAT14Q8WUY8 206 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 LPGAT1Q92604 370 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 HDAC10Q969S8 669 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 TEKT5Q96M29 485 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 HNRNPABQ99729 332 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 SMOQ99835 787 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 GORASP1Q9BQQ3 440 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 FAM192AQ9GZU8 254 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 EML4Q9HC35 981 aaKnown RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 SEMA4BQ9NPR2 832 aaPredicted RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 IGSF9Q9P2J2 1179 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 THEGQ9P2T0 379 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 STK39Q9UEW8 545 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 TRHDEQ9UKU6 1024 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 SF3B1O75533 1304 aaKnown RBP eCLIP8.11□□□□□ -1.11
HPS4-205ENST00000429411 ZNF646O15015 1829 aaPredicted RBP8.11□□□□□ -1.11
HPS4-205ENST00000429411 PHIPQ8WWQ0 1821 aa8.11□□□□□ -1.11
HPS4-205ENST00000429411 ZCWPW2A0A1B0GU75 182 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 MAGEB16A2A368 324 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 G3V2L1 256 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 INPP4BO15327 924 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 NCAM2O15394 837 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 TADA2AO75478 443 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 SIX3O95343 332 aaPredicted RBP8.1□□□□□ -1.11
HPS4-205ENST00000429411 F9P00740 461 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 CD68P34810 354 aaPredicted RBP8.1□□□□□ -1.11
HPS4-205ENST00000429411 MLLT1Q03111 559 aaPredicted RBP8.1□□□□□ -1.11
HPS4-205ENST00000429411 DDR2Q16832 855 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 ZNF789Q5FWF6 425 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 TBCELQ5QJ74 424 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 BTN2A1Q7KYR7 527 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 SETD3Q86TU7 594 aaPredicted RBP8.1□□□□□ -1.11
HPS4-205ENST00000429411 PIM3Q86V86 326 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 THEM5Q8N1Q8 247 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 SKA2Q8WVK7 121 aaPredicted RBP8.1□□□□□ -1.11
HPS4-205ENST00000429411 ZFPM2Q8WW38 1151 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 PBXIP1Q96AQ6 731 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 SMARCD1Q96GM5 515 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 RPL10LQ96L21 214 aaKnown RBP8.1□□□□□ -1.11
HPS4-205ENST00000429411 CYP2S1Q96SQ9 504 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 SLX1AQ9BQ83 275 aa8.1□□□□□ -1.11
HPS4-205ENST00000429411 UBE2OQ9C0C9 1292 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms