RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.87□□□□□ -0.35
SGCE-203ENST00000425444 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 ZFR2Q9UPR6 939 aaKnown RBP12.87□□□□□ -0.35
SGCE-203ENST00000425444 FADS3Q9Y5Q0 445 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 POLQO75417 2590 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 ICE1Q9Y2F5 2266 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 J3KR12 359 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 AP1G1O43747 822 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 THEGLP0DJG4 465 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 XPAP23025 273 aaPredicted RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 ACP1P24666 158 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 ABL2P42684 1182 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 LSSP48449 732 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 PAPOLAP51003 745 aaKnown RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 PIGHQ14442 188 aaPredicted RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 C4orf17Q53FE4 359 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 CCDC81Q6ZN84 652 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 CYP4V2Q6ZWL3 525 aaPredicted RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 PTAR1Q7Z6K3 402 aaPredicted RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 RAB7BQ96AH8 199 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 FEM1CQ96JP0 617 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 CINPQ9BW66 212 aaPredicted RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 SLC39A8Q9C0K1 460 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 POLR1BQ9H9Y6 1135 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 ZNHIT6Q9NWK9 470 aaKnown RBP12.86□□□□□ -0.35
SGCE-203ENST00000425444 SEPT3Q9UH03 358 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 ITM2BQ9Y287 266 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 CHD5Q8TDI0 1954 aa12.86□□□□□ -0.35
SGCE-203ENST00000425444 A6NNZ2 444 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 TSPAN6O43657 245 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 PRAMEF11O60813 436 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 CYP1A2P05177 515 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 TCF4P15884 667 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 IL1R2P27930 398 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
SGCE-203ENST00000425444 CLDN2P57739 230 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 SGCGQ13326 291 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 KRT81Q14533 505 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 CYTH1Q15438 398 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 DPYSL2Q16555 572 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 TMEM259Q4ZIN3 620 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 BOLA3Q53S33 107 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 TTC7BQ86TV6 843 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 SPATS2Q86XZ4 545 aaKnown RBP12.85□□□□□ -0.35
SGCE-203ENST00000425444 NPWQ8N729 165 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 PAF1Q8N7H5 531 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 TMEM145Q8NBT3 493 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 OR13H1Q8NG92 308 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 ZNF564Q8TBZ8 553 aaPredicted RBP12.85□□□□□ -0.35
SGCE-203ENST00000425444 CXorf40AQ8TE69 158 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 CTNNBL1Q8WYA6 563 aaPredicted RBP12.85□□□□□ -0.35
SGCE-203ENST00000425444 DEPDC7Q96QD5 511 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 ERVMER34-1Q9H9K5 563 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 PDFQ9HBH1 243 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 ASCL3Q9NQ33 180 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 CWC15Q9P013 229 aaKnown RBP12.85□□□□□ -0.35
SGCE-203ENST00000425444 LHX3Q9UBR4 397 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
SGCE-203ENST00000425444 MYO1FO00160 1098 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 INSIG1O15503 277 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 SUV39H1O43463 412 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 SDC3O75056 442 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 PALMO75781 387 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 PIGNO95427 931 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 PAK4O96013 591 aaPredicted RBP12.84□□□□□ -0.35
SGCE-203ENST00000425444 RARAP10276 462 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 GJC1P36383 396 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 HCAR3P49019 387 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 DPYSQ14117 519 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 GRM3Q14832 879 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 HADHQ16836 314 aaKnown RBP12.84□□□□□ -0.35
SGCE-203ENST00000425444 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 GCNT7Q6ZNI0 430 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 ARHGAP12Q8IWW6 846 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 OR8K1Q8NGG5 319 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 TEKT4Q8WW24 435 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 STARD5Q9NSY2 213 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 CTTNBP2NLQ9P2B4 639 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 MFHAS1Q9Y4C4 1052 aa12.84□□□□□ -0.35
SGCE-203ENST00000425444 IGLON5A6NGN9 336 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 FPGTO14772 594 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 SIGLEC6O43699 453 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 AKR1B10O60218 316 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 MFAP3LO75121 409 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 CSO75390 466 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 RBMS1P29558 406 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 HNRNPH3P31942 346 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 SERPINB6P35237 376 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 RXRGP48443 463 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 DAB2P98082 770 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms