RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 COX16Q9P0S2 106 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 STK17AQ9UEE5 414 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 XPO7Q9UIA9 1087 aaKnown RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 TMEM184BQ9Y519 407 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 PCDHGA10Q9Y5H3 936 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 CCDC168Q8NDH2 2452 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ANKHD1Q8IWZ3 2542 aaKnown RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 CSMD2Q7Z408 3487 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TNRC6AQ8NDV7 1962 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 C16orf96A6NNT2 1141 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 RNF103O00237 685 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TULP2O00295 520 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 KRIT1O00522 736 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 SNAP91O60641 907 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 KIAA0754O94854 1291 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 ECEL1O95672 775 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 HLA-DRAP01903 254 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 RHOCP08134 193 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 KELP23276 732 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 HNRNPH3P31942 346 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 CSF2RBP32927 897 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 STAT6P42226 847 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 ABL2P42684 1182 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 GPR3P46089 330 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 RGS7P49802 495 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 PLK1P53350 603 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 DAOAP59103 153 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 KRTAP10-9P60411 292 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 RPS15P62841 145 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 IRX6P78412 446 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TLE4Q04727 773 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 LTBQ06643 244 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 BST2Q10589 180 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 ILF3Q12906 894 aaKnown RBP eCLIP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 MAP7Q14244 749 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 INPP5AQ14642 412 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 PLEKHN1Q494U1 663 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 ZC3H12AQ5D1E8 599 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 ANKRD40Q6AI12 368 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 MSANTD2Q6P1R3 559 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TMEM71Q6P5X7 295 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 OGFOD3Q6PK18 319 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 ZNF517Q6ZMY9 492 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 Q71RC1 249 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TTC7BQ86TV6 843 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 RBMXL3Q8N7X1 1067 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 FDCSPQ8NFU4 85 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 OR6K2Q8NGY2 324 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 SPATA3Q8NHX4 192 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 UBA3Q8TBC4 463 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 NCSTNQ92542 709 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 KCTD12Q96CX2 325 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 BTN2A3PQ96KV6 586 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 SPON2Q9BUD6 331 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 APOOQ9BUR5 198 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 NIF3L1Q9GZT8 377 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TMEM168Q9H0V1 697 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 GSX1Q9H4S2 264 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 CNGB3Q9NQW8 809 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 FBXO8Q9NRD0 319 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TFIP11Q9UBB9 837 aaKnown RBP6.37□□□□□ -1.39
SDCBP-203ENST00000424270 TSPAN16Q9UKR8 245 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 PADI1Q9ULC6 663 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 HS3ST2Q9Y278 367 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 B3GNT3Q9Y2A9 372 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 SHANK1Q9Y566 2161 aa6.37□□□□□ -1.39
SDCBP-203ENST00000424270 IGHV1OR21-1A0A087WYE8 117 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 RASA4BC9J798 803 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 H3BQV1 296 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 IKBKBO14920 756 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 KCNN4O15554 427 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 RASA4O43374 803 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 SMAD6O43541 496 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 NDUFA10O95299 355 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 DLGAP3O95886 979 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 ASS1P00966 412 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 MT-ND3P03897 115 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 ALPPP05187 535 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 KLK2P20151 261 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 GARSP41250 739 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 CCNHP51946 323 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 NEK4P51957 841 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 GPLD1P80108 840 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 ADAM9Q13443 819 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 PEX6Q13608 980 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 TSR1Q2NL82 804 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 SKOR2Q2VWA4 1001 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 CARD16Q5EG05 197 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 CXorf57Q6NSI4 855 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 SLC30A9Q6PML9 568 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 BNC2Q6ZN30 1099 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 NYAP1Q6ZVC0 841 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 BHLHA9Q7RTU4 235 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 MRGPRGQ86SM5 289 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 ZNF761Q86XN6 746 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 TTC39CQ8N584 583 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 PAF1Q8N7H5 531 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 BMPERQ8N8U9 685 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms