RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ALDOCP09972 364 aaKnown RBP16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 NCAM1P13591 858 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 FASP25445 335 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 KPNA1P52294 538 aaPredicted RBP16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 SNX16P57768 344 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 POU6F1Q14863 301 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 RGS21Q2M5E4 152 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 CYBRD1Q53TN4 286 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 ZNF362Q5T0B9 420 aaPredicted RBP16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 CATSPERGQ6ZRH7 1159 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 HDAC10Q969S8 669 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 C3orf30Q96M34 536 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 ADAMTS10Q9H324 1103 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 GNPTGQ9UJJ9 305 aa16.77■□□□□ 0.27
NPC1L1-203ENST00000423141 MAGEB16A2A368 324 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 CFAP99D6REC4 459 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 M0QYT0 321 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 NR5A2O00482 541 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 UBFD1O14562 309 aaKnown RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 RASAL1O95294 804 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 MTHFD1P11586 935 aaKnown RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ATP5F1P24539 256 aaPredicted RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 NPY2RP49146 381 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 EIF2B2P49770 351 aaKnown RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 TNFAIP2Q03169 654 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ADIGQ0VDE8 80 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 VPS26BQ4G0F5 336 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ZNF618Q5T7W0 954 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 OTOP3Q7RTS5 596 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ZNF354CQ86Y25 554 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 SLC2A14Q8TDB8 520 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ZMAT2Q96NC0 199 aaKnown RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 MRPL57Q9BQC6 102 aaKnown RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 C9orf16Q9BUW7 83 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 CDHR5Q9HBB8 845 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 SLC2A6Q9UGQ3 507 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ERGIC3Q9Y282 383 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 PTGDR2Q9Y5Y4 395 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 A8MT66 165 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 CCNA2P20248 432 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 PSMA4P25789 261 aaKnown RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ARNTP27540 789 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 NOS2P35228 1153 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 LAMC2Q13753 1193 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 IGFN1Q86VF2 1251 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ERO1BQ86YB8 467 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 ADGRG5Q8IZF4 528 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 TTC39CQ8N584 583 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 BPIFB6Q8NFQ5 453 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 MAGEE2Q8TD90 523 aaPredicted RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 COPS5Q92905 334 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 CENPNQ96H22 339 aaPredicted RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 SEZ6LQ9BYH1 1024 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 R3HDMLQ9H3Y0 253 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 FANCEQ9HB96 536 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 IGSF5Q9NSI5 407 aa16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 MTF2Q9Y483 593 aaPredicted RBP16.76■□□□□ 0.27
NPC1L1-203ENST00000423141 CLASP2O75122 1294 aaKnown RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 STAU1O95793 577 aaKnown RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 VTNP04004 478 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 ELK4P28324 431 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 TTKP33981 857 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 SLC1A2P43004 574 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 TMED10P49755 219 aaKnown RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 NDUFV1P49821 464 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 BCAT1P54687 386 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 IRAK1BP1Q5VVH5 260 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 ESRP1Q6NXG1 681 aaKnown RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 SPRED1Q7Z699 444 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 DDIASQ8IXT1 998 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 OR13F1Q8NGS4 319 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 SPATA22Q8NHS9 363 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 USP33Q8TEY7 942 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 C18orf25Q96B23 403 aaPredicted RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 TBC1D13Q9NVG8 400 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 GID8Q9NWU2 228 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 IFT80Q9P2H3 777 aaPredicted RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 GSTT2P0CG29 244 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 GSTT2BP0CG30 244 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 IL10P22301 178 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 CAPGP40121 348 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 CXCL9Q07325 125 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 CDH17Q12864 832 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 RBM20Q5T481 1227 aaKnown RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 ARHGAP17Q68EM7 881 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 HACD2Q6Y1H2 254 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 HFE2Q6ZVN8 426 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 DHRSXQ8N5I4 330 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 SGCDQ92629 289 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 ZUFSPQ96AP4 578 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 CSF3RQ99062 836 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 KIFC1Q9BW19 673 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 SNX25Q9H3E2 840 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 NANOGQ9H9S0 305 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 CMTM6Q9NX76 183 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 KIAA1522Q9P206 1035 aaPredicted RBP16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 SNX10Q9Y5X0 201 aa16.75■□□□□ 0.27
NPC1L1-203ENST00000423141 CITO14578 2027 aa16.74■□□□□ 0.27
NPC1L1-203ENST00000423141 ONECUT3O60422 494 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms