RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RNF19BQ6ZMZ0 732 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 MFSD3Q96ES6 412 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 MCMBPQ9BTE3 642 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 XYLT2Q9H1B5 865 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 NOL6Q9H6R4 1146 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 GABBR1Q9UBS5 961 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 MTF2Q9Y483 593 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 PCDHA10Q9Y5I2 948 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 A0A1W2PQ67 120 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 H0Y858 1186 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 K7ERI5 159 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 NFIBO00712 420 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 DYRK3O43781 588 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 DLX3O60479 287 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ALBP02768 609 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 GTF2A2P52657 109 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 CSE1LP55060 971 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 GJA9P57773 515 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ACER1Q8TDN7 264 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 BHMTQ93088 406 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 MUL1Q969V5 352 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF669Q96BR6 464 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 MASTLQ96GX5 879 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 VPS39Q96JC1 886 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 SH3GL1Q99961 368 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 TLR9Q9NR96 1032 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 TBC1D14Q9P2M4 693 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 TMX2Q9Y320 296 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 LOC285556D6RIA3 1793 aa8.07□□□□□ -1.12
HMGXB4-202ENST00000418170 RFPL2O75678 378 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 BBOX1O75936 387 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 DNAJB5O75953 348 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 MICAL2O94851 1124 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SHMT2P34897 504 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 GPD2P43304 727 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 GLRBP48167 497 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 TRPC1P48995 793 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 CHRNEQ04844 493 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 FRG1Q14331 258 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 POLD3Q15054 466 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 MAPK11Q15759 364 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 CCDC14Q49A88 953 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 R3HCC1LQ7Z5L2 792 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 FSTL5Q8N475 847 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 CCNYL1Q8N7R7 359 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 PIWIL1Q96J94 861 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SCYL1Q96KG9 808 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 TSNARE1Q96NA8 513 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 RHOBTB2Q9BYZ6 727 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 ING2Q9H160 280 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 MEAF6Q9HAF1 191 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 LRRC4Q9HBW1 653 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 NGRNQ9NPE2 291 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 EGFL7Q9UHF1 273 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 TLK1Q9UKI8 766 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 DOCK5Q9H7D0 1870 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SNPHO15079 494 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 GFAPP14136 432 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 ARSAP15289 507 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 HADHAP40939 763 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 TNFSF9P41273 254 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 ECT2LQ008S8 904 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 DUOXA2Q1HG44 320 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 ANO4Q32M45 955 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 PAGE2BQ5JRK9 111 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SIGIRRQ6IA17 410 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 TMEM135Q86UB9 458 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 OR6Q1Q8NGQ2 317 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SGCDQ92629 289 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 MED30Q96HR3 178 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 PGLYRP2Q96PD5 576 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 BCL7BQ9BQE9 202 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 LRRC40Q9H9A6 602 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 CRNNQ9UBG3 495 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SEPT9Q9UHD8 586 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 RLFQ13129 1914 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SBF1O95248 1867 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 ZCWPW2A0A1B0GU75 182 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 ISPDA4D126 451 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 DPYSL4O14531 572 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 HOXC11O43248 304 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 PLA2G6O60733 806 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 XYLBO75191 536 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 GPC4O75487 556 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 NPM3O75607 178 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 EDN1P05305 212 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 HTR1AP08908 422 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 RAP1GAPP47736 663 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 KRT6CP48668 564 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 PHC1P78364 1004 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 HIST2H2ACQ16777 129 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 TSTD2Q5T7W7 516 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 PIWIL4Q7Z3Z4 852 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 OR9I1Q8NGQ6 314 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 CHAC2Q8WUX2 184 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 VPS33AQ96AX1 596 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 UBXN10Q96LJ8 280 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 HOPXQ9BPY8 73 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms