RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 LIN9Q5TKA1 542 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 KAZNQ674X7 775 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 C1orf228Q6PIY5 440 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 TMEM108Q6UXF1 575 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 DHX40Q8IX18 779 aaKnown RBP5.39□□□□□ -1.55
CSTF1-202ENST00000415828 NME8Q8N427 588 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 KCNE4Q8WWG9 221 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 SLC9A6Q92581 669 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 ACTRT3Q9BYD9 372 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 FAM204AQ9H8W3 233 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 IL17RBQ9NRM6 502 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 ERAP1Q9NZ08 941 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.39□□□□□ -1.55
CSTF1-202ENST00000415828 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 HESX1Q9UBX0 185 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 SSX2IPQ9Y2D8 614 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 SLC4A4Q9Y6R1 1079 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 TDRD6O60522 2096 aaKnown RBP5.39□□□□□ -1.55
CSTF1-202ENST00000415828 ABCB11O95342 1321 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 WDR19Q8NEZ3 1342 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 PKDREJQ9NTG1 2253 aa5.39□□□□□ -1.55
CSTF1-202ENST00000415828 TLN2Q9Y4G6 2542 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 CFAP69A5D8W1 941 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 RRN3P2A6NIE6 340 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 PHGDHO43175 533 aaKnown RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 TNFSF14O43557 240 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 CSDE1O75534 798 aaKnown RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 C1RP00736 705 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 HSPD1P10809 573 aaKnown RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 TYRP1P17643 537 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 KLRC1P26715 233 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 SLC7A1P30825 629 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 HOXA9P31269 272 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 HOXA13P31271 388 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 HOXD12P35452 270 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 HNF1BP35680 557 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 AGFG1P52594 562 aaKnown RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 ZNF134P52741 427 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 CRYBB1P53674 252 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 UCP3P55916 312 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 TFAP4Q01664 338 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 BNC1Q01954 994 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 FCHO2Q0JRZ9 810 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 EIF2B5Q13144 721 aaKnown RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 ZNF169Q14929 603 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 IQCB1Q15051 598 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 WDR43Q15061 677 aaKnown RBP eCLIP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 GFOD2Q3B7J2 385 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 VPS53Q5VIR6 699 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 ZNF783Q6ZMS7 281 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 MAEAQ7L5Y9 396 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 ZNF444Q8N0Y2 327 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 MPP5Q8N3R9 675 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 MIB2Q96AX9 1013 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 CCDC136Q96JN2 1154 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 CNOT6LQ96LI5 555 aaKnown RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 SEMA3CQ99985 751 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 UNKQ9C0B0 810 aaKnown RBP5.38□□□□□ -1.55
CSTF1-202ENST00000415828 TMEM60Q9H2L4 133 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 GAREM1Q9H706 876 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 TM7SF3Q9NS93 570 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 XPR1Q9UBH6 696 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 PNMA2Q9UL42 364 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 STX8Q9UNK0 236 aa5.38□□□□□ -1.55
CSTF1-202ENST00000415828 TNRC6AQ8NDV7 1962 aaKnown RBP5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SCN8AQ9UQD0 1980 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 A6NNZ2 444 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 ANP32CO43423 234 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 TSPY3P0CV98 308 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 TSPY8P0CW00 308 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 OR1G1P47890 313 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 CLK3P49761 638 aaKnown RBP5.37□□□□□ -1.55
CSTF1-202ENST00000415828 LILRA4P59901 499 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 ZNF33AQ06730 810 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 GRSF1Q12849 480 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSTF1-202ENST00000415828 DNAJC3Q13217 504 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SRSF6Q13247 344 aaKnown RBP5.37□□□□□ -1.55
CSTF1-202ENST00000415828 NEDD9Q14511 834 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 GRM3Q14832 879 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 CNN3Q15417 329 aaKnown RBP5.37□□□□□ -1.55
CSTF1-202ENST00000415828 ARL13BQ3SXY8 428 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SWSAP1Q6NVH7 229 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 PEG10Q86TG7 708 aaKnown RBP5.37□□□□□ -1.55
CSTF1-202ENST00000415828 ADGRG3Q86Y34 549 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 YAF2Q8IY57 180 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SLC15A4Q8N697 577 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 OR6B3Q8NGW1 331 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SPATA3Q8NHX4 192 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 FAM136AQ96C01 138 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 MOGAT1Q96PD6 335 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 DUSP26Q9BV47 211 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SPATA5L1Q9BVQ7 753 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SLC25A18Q9H1K4 315 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 TRPV4Q9HBA0 871 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 SMC4Q9NTJ3 1288 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 DONSONQ9NYP3 566 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 PTGFRNQ9P2B2 879 aa5.37□□□□□ -1.55
CSTF1-202ENST00000415828 CACNG4Q9UBN1 327 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms