RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ZNF578Q96N58 590 aaPredicted RBP14.86□□□□□ -0.03
CBX3-203ENST00000409747 DOLKQ9UPQ8 538 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 PCDHB1Q9Y5F3 818 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 DDX3XO00571 662 aaKnown RBP eCLIP14.86□□□□□ -0.034e-23■■□□□ 12.3
CBX3-203ENST00000409747 USP12O75317 370 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 LRCH4O75427 683 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 TCEA3O75764 348 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 ALPIP09923 528 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 ITIH2P19823 946 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 PCK1P35558 622 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 LIG3P49916 1009 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 RENBPP51606 427 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 ADKP55263 362 aaKnown RBP14.86□□□□□ -0.03
CBX3-203ENST00000409747 TPM4P67936 248 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 GABREP78334 506 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 BCL2L1Q07817 233 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
CBX3-203ENST00000409747 GUSBP11Q6P575 273 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 CAMK1DQ8IU85 385 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 ARFGAP1Q8N6T3 406 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 TSEN2Q8NCE0 465 aaKnown RBP14.86□□□□□ -0.03
CBX3-203ENST00000409747 COQ6Q9Y2Z9 468 aa14.86□□□□□ -0.03
CBX3-203ENST00000409747 ATRXP46100 2492 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 EIF4E1BA6NMX2 242 aaKnown RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 H3BRJ5 948 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 BUB1BO60566 1050 aaPredicted RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 GCATO75600 419 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 DXOO77932 396 aaKnown RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 RASGRP1O95267 797 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 CTSEP14091 401 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 ARL4AP40617 200 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 HK3P52790 923 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 PCBP4P57723 403 aaKnown RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 AP1S1P61966 158 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 MTM1Q13496 603 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 COL9A2Q14055 689 aaPredicted RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 NFATC4Q14934 902 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 WSCD2Q2TBF2 565 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 SOWAHCQ53LP3 525 aaPredicted RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 TMCO4Q5TGY1 634 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 LVRNQ6Q4G3 990 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 RBM44Q6ZP01 1051 aaKnown RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 ARHGAP12Q8IWW6 846 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 ZNF248Q8NDW4 579 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 ZNF599Q96NL3 588 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 TCEAL2Q9H3H9 227 aaPredicted RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 POLR1BQ9H9Y6 1135 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 SEPT3Q9UH03 358 aa14.85□□□□□ -0.03
CBX3-203ENST00000409747 BZW2Q9Y6E2 419 aaKnown RBP14.85□□□□□ -0.03
CBX3-203ENST00000409747 A0A1W2PQ67 120 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 MUSKO15146 869 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 MPOP05164 745 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 TSHRP16473 764 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 TGM2P21980 687 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 ITPKBP27987 946 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 LSSP48449 732 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 ERVPABLB-1P60509 514 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 C1orf61Q13536 156 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 DPYSQ14117 519 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 DPYSL2Q16555 572 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 ISXQ2M1V0 245 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 TDRD12Q587J7 1177 aaKnown RBP14.84□□□□□ -0.03
CBX3-203ENST00000409747 E4F1Q66K89 784 aaPredicted RBP14.84□□□□□ -0.03
CBX3-203ENST00000409747 CYP4V2Q6ZWL3 525 aaPredicted RBP14.84□□□□□ -0.03
CBX3-203ENST00000409747 HID1Q8IV36 788 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 SLC35F3Q8IY50 421 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 NPWQ8N729 165 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 ARL10Q8N8L6 244 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 ECHDC3Q96DC8 303 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
CBX3-203ENST00000409747 PSKH2Q96QS6 385 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 UBL7Q96S82 380 aaPredicted RBP14.84□□□□□ -0.03
CBX3-203ENST00000409747 LGMNQ99538 433 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 APOOQ9BUR5 198 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 TRIM7Q9C029 511 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 ISCUQ9H1K1 167 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 CWC15Q9P013 229 aaKnown RBP14.84□□□□□ -0.03
CBX3-203ENST00000409747 MYO1AQ9UBC5 1043 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 PNMA8BQ9ULN7 279 aaPredicted RBP14.84□□□□□ -0.03
CBX3-203ENST00000409747 LRRK1Q38SD2 2015 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 ANKRD36A6QL64 1941 aa14.84□□□□□ -0.03
CBX3-203ENST00000409747 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.83□□□□□ -0.03
CBX3-203ENST00000409747 YY2O15391 372 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 PCCBP05166 539 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 ELFN1P0C7U0 828 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 NFKBIAP25963 317 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 HSPA9P38646 679 aaKnown RBP14.83□□□□□ -0.03
CBX3-203ENST00000409747 RGRP47804 291 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 INPP5AQ14642 412 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 LBRQ14739 615 aaKnown RBP14.83□□□□□ -0.03
CBX3-203ENST00000409747 BOLA3Q53S33 107 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 ENPP7Q6UWV6 458 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 ZSWIM9Q86XI8 627 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 GKN2Q86XP6 184 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 BBS5Q8N3I7 341 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 WDR92Q96MX6 357 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 CLPBQ9H078 707 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 THSD1Q9NS62 852 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 KLQ9UEF7 1012 aa14.83□□□□□ -0.03
CBX3-203ENST00000409747 SMG1Q96Q15 3661 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms