RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 QPCTQ16769 361 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 GAB4Q2WGN9 574 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 VITQ6UXI7 678 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 NLRP9Q7RTR0 991 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 OR2AP1Q8NGE2 309 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 BRSK1Q8TDC3 778 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 VOPP1Q96AW1 172 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CENPTQ96BT3 561 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ATXN7L3BQ96GX2 97 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 APOPT1Q96IL0 206 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 HPS4Q9NQG7 708 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 NKIRAS1Q9NYS0 192 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 A6NNZ2 444 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 AURKAO14965 403 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 SIN3BO75182 1162 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 PGLSO95336 258 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 SLC8A1P32418 973 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 SLC1A2P43004 574 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 DGKGP49619 791 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 LIMK2P53671 638 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CSE1LP55060 971 aaKnown RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 TMPRSS15P98073 1019 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ACVR1Q04771 509 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 PTPRRQ15256 657 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 TUBB8Q3ZCM7 444 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ATAT1Q5SQI0 421 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 TIFABQ6ZNK6 161 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CAMK1DQ8IU85 385 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 DENND6AQ8IWF6 608 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ETFBKMTQ8IXQ9 262 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 RYBPQ8N488 228 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 MDGA1Q8NFP4 955 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 OR13C4Q8NGS5 318 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 DENND1AQ8TEH3 1009 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CYB5D2Q8WUJ1 264 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 SORCS1Q8WY21 1168 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ISG20Q96AZ6 181 aaKnown RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ALKBH8Q96BT7 664 aaKnown RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 DNAJC1Q96KC8 554 aaKnown RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 FAM83CQ9BQN1 747 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 FAM167BQ9BTA0 163 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ADGRE3Q9BY15 652 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CEP44Q9C0F1 390 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ZFP14Q9HCL3 533 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CLDND1Q9NY35 253 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 SLCO3A1Q9UIG8 710 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ERVW-1Q9UQF0 538 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 PCDHB9Q9Y5E1 797 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 PRRC2BQ5JSZ5 2229 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 ANKRD66B4E2M5 251 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 TRAFD1O14545 582 aaPredicted RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 TPP1O14773 563 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 TULP3O75386 442 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 GSRP00390 522 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 ALDOAP04075 364 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 POLR2EP19388 210 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 SP100P23497 879 aaPredicted RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 MAPK8P45983 427 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 NEK3P51956 506 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 ZNF140P52738 457 aaPredicted RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 SLC18A1P54219 525 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 WDR4P57081 412 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 SNRPD1P62314 119 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 BCL2L1Q07817 233 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 LAMB3Q13751 1172 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 THOC5Q13769 683 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 CTC1Q2NKJ3 1217 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 ARMC12Q5T9G4 340 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 ZNF470Q6ECI4 717 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 CES5AQ6NT32 575 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 EP400NLQ6ZTU2 488 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 GLT6D1Q7Z4J2 308 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 DCLK2Q8N568 766 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 PCDH20Q8N6Y1 951 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 GDAP1Q8TB36 358 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 HDAC10Q969S8 669 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 SGSM3Q96HU1 749 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 MRGPRX3Q96LB0 322 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 PLA2G2FQ9BZM2 168 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 TTYH1Q9H313 450 aaPredicted RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 C12orf65Q9H3J6 166 aaKnown RBP14.13□□□□□ -0.15
GPNMB-203ENST00000409458 PCMTD2Q9NV79 361 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 NSMCE4AQ9NXX6 385 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 LMCD1Q9NZU5 365 aa14.13□□□□□ -0.15
GPNMB-203ENST00000409458 MUC22E2RYF6 1773 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 OR51F1A6NGY5 319 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 HTRA2O43464 458 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 BNIP3LO60238 219 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 SOCS5O75159 536 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 CRTAMO95727 393 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 SLC4A1P02730 911 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 GABRB3P28472 473 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 SPRP35270 261 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 GRIA4P48058 902 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 SLC6A11P48066 632 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 CCNHP51946 323 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-203ENST00000409458 FCHO2Q0JRZ9 810 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 MESP2Q0VG99 397 aa14.12□□□□□ -0.15
GPNMB-203ENST00000409458 CTBP1Q13363 440 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms