RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SQORQ9Y6N5 450 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 BRWD1Q9NSI6 2320 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 ZMYM2Q9UBW7 1377 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 COL4A4P53420 1690 aaPredicted RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 TECTAO75443 2155 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 A0A087X0T9 212 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 A0A088AWK7 358 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 C15orf38-AP3S2A0A0A6YYH1 394 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 LRRC14BA6NHZ5 514 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 BOLA2-SMG1P6H3BVE0 249 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 VILLO15195 856 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 NUAK1O60285 661 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 DKC1O60832 514 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLK1-202ENST00000409403 RNASEH1O60930 286 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 CNOT3O75175 753 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 ARIH2O95376 493 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 AMY1AP04745 511 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 IGKV5-2P06315 115 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 SPATA31D3P0C874 917 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 FAM228BP0C875 321 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 GSTT2P0CG29 244 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 GSTT2BP0CG30 244 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 CYP2C9P11712 490 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 KRT4P19013 534 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 RXRAP19793 462 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 DDCP20711 480 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 HMOX2P30519 316 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 GUCY1A2P33402 732 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 IGHMBP2P38935 993 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 PRKCIP41743 596 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 NEK3P51956 506 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 POLR2FP61218 127 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 PPARDQ03181 441 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 ZBTB16Q05516 673 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 ORC2Q13416 577 aaPredicted RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 THOC5Q13769 683 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 CNGA3Q16281 694 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 SEL1L2Q5TEA6 688 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 NIPAL1Q6NVV3 410 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 ALKBH5Q6P6C2 394 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 C17orf99Q6UX52 265 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 DSTYKQ6XUX3 929 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 GADL1Q6ZQY3 521 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 MFSD6Q6ZSS7 791 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 SPATA31D4Q6ZUB0 917 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 PDZD4Q76G19 769 aaPredicted RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 ARPINQ7Z6K5 226 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 DHDDSQ86SQ9 333 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 NT5DC3Q86UY8 548 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 TMPRSS6Q8IU80 811 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 TMEM126BQ8IUX1 230 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 MARVELD2Q8N4S9 558 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLK1-202ENST00000409403 CCDC89Q8N998 374 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 IFI44Q8TCB0 444 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 DTX3LQ8TDB6 740 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 GRK7Q8WTQ7 553 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 RFFLQ8WZ73 363 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 STARD8Q92502 1023 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 BADQ92934 168 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 MTFMTQ96DP5 389 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 PTCD3Q96EY7 689 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 SLC39A13Q96H72 371 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 FAM167AQ96KS9 214 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 RPL10LQ96L21 214 aaKnown RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 OSBPL10Q9BXB5 764 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 NACAP1Q9BZK3 213 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 LDAHQ9H6V9 325 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 ZNF696Q9H7X3 374 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 C10orf88Q9H8K7 445 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 ATAD3AQ9NVI7 634 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 GIN1Q9NXP7 522 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 GRHL1Q9NZI5 618 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 EPS15L1Q9UBC2 864 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 AJAP1Q9UKB5 411 aaPredicted RBP5.57□□□□□ -1.52
CLK1-202ENST00000409403 SNX24Q9Y343 169 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 MYH4Q9Y623 1939 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 TRIOO75962 3097 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 CACNA1HO95180 2353 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 PLXNB2O15031 1838 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 ATAD5Q96QE3 1844 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 ZFYVE26Q68DK2 2539 aa5.57□□□□□ -1.52
CLK1-202ENST00000409403 PRR23AA6NEV1 266 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 ZNF701M0R085 212 aaPredicted RBP5.56□□□□□ -1.52
CLK1-202ENST00000409403 EYA2O00167 538 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 EPHB6O15197 1021 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 PMM2O15305 246 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 THAP12O43422 761 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 TGDSO95455 350 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 STARD3NLO95772 234 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 TTC4O95801 387 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 OCM2P0CE71 109 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 OCMP0CE72 109 aaPredicted RBP5.56□□□□□ -1.52
CLK1-202ENST00000409403 RARBP10826 455 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 ALAS1P13196 640 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 VCLP18206 1134 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 CDH3P22223 829 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 FGFR4P22455 802 aa5.56□□□□□ -1.52
CLK1-202ENST00000409403 PTPN7P35236 360 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms