RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 OSER1Q9NX31 292 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CDH22Q9UJ99 828 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 E2F8A0AVK6 867 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZNF840PA6NDX5 716 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 C2P06681 752 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NCAM1P13591 858 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NFKB1P19838 968 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NUMBP49757 651 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZBTB17Q13105 803 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 RALGPS1Q5JS13 557 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CERCAMQ5T4B2 595 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 VWA5B1Q5TIE3 1220 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DHDDSQ86SQ9 333 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC25A41Q8N5S1 370 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 C12orf76Q8N812 135 aaPredicted RBP16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZNF781Q8N8C0 355 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ADAM32Q8TC27 787 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 AZIN2Q96A70 460 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ATXN7L3BQ96GX2 97 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CORO1BQ9BR76 489 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 YIPF3Q9GZM5 350 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ASAH2Q9NR71 780 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 HCFC1R1Q9NWW0 138 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ARHGAP26Q9UNA1 814 aa16.07■□□□□ 0.16
CHRFAM7A-203ENST00000401522 REV3LO60673 3130 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 I6L893 689 aaPredicted RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 BUD23O43709 281 aaKnown RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 FGF19O95750 216 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 COX4I1P13073 169 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ITGAXP20702 1163 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GMPRP36959 345 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CCNHP51946 323 aaPredicted RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 COG7P83436 770 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZNF33AQ06730 810 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ANO4Q32M45 955 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 BTBD8Q5XKL5 378 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NAPEPLDQ6IQ20 393 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NAPRTQ6XQN6 538 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GAREM2Q75VX8 874 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 LINC00523Q86TU6 105 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 HS6ST3Q8IZP7 471 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DEFB123Q8N688 67 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TDRD5Q8NAT2 981 aaKnown RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 STON2Q8WXE9 905 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MFSD3Q96ES6 412 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 VPS39Q96JC1 886 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TEKT5Q96M29 485 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 RTKNQ9BST9 563 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 OXSMQ9NWU1 459 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TRPM5Q9NZQ8 1165 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PDP2Q9P2J9 529 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MYO16Q9Y6X6 1858 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ATP9BO43861 1147 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CXCR3P49682 368 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 XIAPP98170 497 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 IRF9Q00978 393 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CDH17Q12864 832 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CDC16Q13042 620 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 USP4Q13107 963 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 KLF10Q13118 480 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CCNIQ14094 377 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TMC5Q6UXY8 1006 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZYG11AQ6WRX3 759 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 KLHDC8BQ8IXV7 354 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PHTF2Q8N3S3 785 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MYLIPQ8WY64 445 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SMG7Q92540 1137 aaKnown RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 EDEM1Q92611 657 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PABPC5Q96DU9 382 aaKnown RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TSNARE1Q96NA8 513 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GUCD1Q96NT3 240 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GPR22Q99680 433 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CCDC28BQ9BUN5 200 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ILKAPQ9H0C8 392 aaPredicted RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CAB39LQ9H9S4 337 aa16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 IARS2Q9NSE4 1012 aaKnown RBP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MYO18AQ92614 2054 aaKnown RBP16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DCXO43602 365 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 RHOP08100 348 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GABRR2P28476 465 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 LTBRP36941 435 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CSRP3P50461 194 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 EPHB1P54762 984 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CUL3Q13618 768 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 HNRNPDQ14103 355 aaKnown RBP16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 FRMD7Q6ZUT3 714 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GPR149Q86SP6 731 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DEFB107AQ8IZN7 70 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 FBXW8Q8N3Y1 598 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 IFT43Q96FT9 208 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TSGA13Q96PP4 275 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TRAPPC9Q96Q05 1148 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 KIFC1Q9BW19 673 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GATA5Q9BWX5 397 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms