RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 MMP2P08253 660 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 ODC1P11926 461 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 AKR1A1P14550 325 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 ACADSP16219 412 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 AP2B1P63010 937 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 FLOT2Q14254 428 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 MS4A13Q5J8X5 152 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SIRPB2Q5JXA9 342 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SMYD5Q6GMV2 418 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 VPS33AQ96AX1 596 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 RHOJQ9H4E5 214 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 ABT1Q9ULW3 272 aaKnown RBP11.81□□□□□ -0.52
ITSN1-211ENST00000399355 LRCH1Q9Y2L9 728 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 A8MT66 165 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 LINC00032P0C843 101 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 TSHRP16473 764 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SCNN1BP51168 640 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SNX16P57768 344 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 NSUN2Q08J23 767 aaKnown RBP eCLIP11.81□□□□□ -0.52
ITSN1-211ENST00000399355 CYTH1Q15438 398 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 ZNF549Q6P9A3 640 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 ICA1LQ8NDH6 482 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SP110Q9HB58 689 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SPO11Q9Y5K1 396 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SLC4A7Q9Y6M7 1214 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 RALGAPA2Q2PPJ7 1873 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 TCAF2A6NFQ2 919 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 TARM1B6A8C7 271 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 HDAC3O15379 428 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 RNASEH2AO75792 299 aaKnown RBP11.81□□□□□ -0.52
ITSN1-211ENST00000399355 OR1E1P30953 314 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 CCNG1P51959 295 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 MAPK10P53779 464 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 FUT11Q495W5 492 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 LIPMQ5VYY2 423 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 CHST15Q7LFX5 561 aaPredicted RBP11.81□□□□□ -0.52
ITSN1-211ENST00000399355 NET1Q7Z628 596 aaPredicted RBP11.81□□□□□ -0.52
ITSN1-211ENST00000399355 SERINC5Q86VE9 423 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 FBXW8Q8N3Y1 598 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 GATA6Q92908 595 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 WDR41Q9HAD4 459 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 IGSF5Q9NSI5 407 aa11.81□□□□□ -0.52
ITSN1-211ENST00000399355 ZFC3H1O60293 1989 aaKnown RBP11.81□□□□□ -0.52
ITSN1-211ENST00000399355 PRORSD1PA6NEY8 169 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 MAGEC1O60732 1142 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 NCK1P16333 377 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 SLC12A2P55011 1212 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 CDH15P55291 814 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 OR10Q1Q8NGQ4 319 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 ZNF483Q8TF39 744 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-211ENST00000399355 TCAF1Q9Y4C2 921 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 IQCA1LA6NCM1 817 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 CCDC160A6NGH7 325 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 FBP2O00757 339 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 SDHDO14521 159 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 KPNA6O60684 536 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 SKIP12755 728 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 DNAJB2P25686 324 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 PCSK1P29120 753 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 DIO3P55073 304 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 OR4D1Q15615 310 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 MMEL1Q495T6 779 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 VPS26BQ4G0F5 336 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 NAPEPLDQ6IQ20 393 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 FAM171BQ6P995 826 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 BCL7CQ8WUZ0 217 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-211ENST00000399355 PKMYT1Q99640 499 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 CIB1Q99828 191 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 MCMBPQ9BTE3 642 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 PATJQ8NI35 1801 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 SCN10AQ9Y5Y9 1956 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 ALDOCP09972 364 aaKnown RBP11.8□□□□□ -0.52
ITSN1-211ENST00000399355 FMO4P31512 558 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 SLC6A4P31645 630 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 SH3BP2P78314 561 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 FOXD4Q12950 439 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-211ENST00000399355 FAM83EQ2M2I3 478 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 TRMT5Q32P41 509 aaKnown RBP11.8□□□□□ -0.52
ITSN1-211ENST00000399355 MTX3Q5HYI7 312 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 NADSYN1Q6IA69 706 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 PGM2L1Q6PCE3 622 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 DCLRE1AQ6PJP8 1040 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 RANBP10Q6VN20 620 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 MYO1HQ8N1T3 1032 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 TRPC4APQ8TEL6 797 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 STYXQ8WUJ0 223 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 LRTOMTQ8WZ04 291 aa11.8□□□□□ -0.52
ITSN1-211ENST00000399355 CORO1CQ9ULV4 474 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-211ENST00000399355 K7ERQ8 282 aa11.79□□□□□ -0.52
ITSN1-211ENST00000399355 SEC24DO94855 1032 aaPredicted RBP11.79□□□□□ -0.52
ITSN1-211ENST00000399355 PRAMEP78395 509 aa11.79□□□□□ -0.52
ITSN1-211ENST00000399355 VARS2Q5ST30 1063 aaKnown RBP11.79□□□□□ -0.52
ITSN1-211ENST00000399355 FERMT1Q9BQL6 677 aa11.79□□□□□ -0.52
ITSN1-211ENST00000399355 KIFC1Q9BW19 673 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms