RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 ALG14Q96F25 216 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 FRMD8Q9BZ67 464 aaPredicted RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 POLR1EQ9GZS1 481 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 EIF2B3Q9NR50 452 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 DNAJC17Q9NVM6 304 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 ZNF446Q9NWS9 450 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 KLK13Q9UKR3 277 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ATP8A1Q9Y2Q0 1164 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 AAR2Q9Y312 384 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 SPAARA0A1B0GVQ0 90 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 TCRBV7S3A2A0A539 114 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ERI2A8K979 691 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 PSMD3O43242 534 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 CACNG3O60359 315 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ZMPSTE24O75844 475 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 TMEM63AO94886 807 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 CAPNS1P04632 268 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 PABPC1P11940 636 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 ITPKAP23677 461 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 HOXD12P35452 270 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ARF5P84085 180 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 HIF1AQ16665 826 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 PITRM1Q5JRX3 1037 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 CENPUQ71F23 418 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 PDIK1LQ8N165 341 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 HMGB4Q8WW32 186 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ZNF419Q96HQ0 510 aaPredicted RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 LMLNQ96KR4 655 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 FCRL5Q96RD9 977 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 RBM15Q96T37 977 aaKnown RBP eCLIP13.39□□□□□ -0.278e-6■■□□□ 12.8
SEC13-209ENST00000397117 SLC25A51Q9H1U9 297 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ZDHHC4Q9NPG8 344 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 BCCIPQ9P287 314 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEC13-209ENST00000397117 SLC6A14Q9UN76 642 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.38□□□□□ -0.27
SEC13-209ENST00000397117 AP2A1O95782 977 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 HSPA9P38646 679 aaKnown RBP13.38□□□□□ -0.27
SEC13-209ENST00000397117 DGKGP49619 791 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 GEMP55040 296 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 MAXP61244 160 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 SIM1P81133 766 aaPredicted RBP13.38□□□□□ -0.27
SEC13-209ENST00000397117 SULT2A1Q06520 285 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 SLC20A2Q08357 652 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 DUOXA1Q1HG43 343 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 FUT11Q495W5 492 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 INO80DQ53TQ3 878 aaPredicted RBP13.38□□□□□ -0.27
SEC13-209ENST00000397117 TMC3Q7Z5M5 1100 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 ETFBKMTQ8IXQ9 262 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 MCUQ8NE86 351 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 CEP76Q8TAP6 659 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 KCNV2Q8TDN2 545 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 LRRC40Q9H9A6 602 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 CAPN10Q9HC96 672 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 XAB2Q9HCS7 855 aaKnown RBP13.38□□□□□ -0.27
SEC13-209ENST00000397117 UBP1Q9NZI7 540 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 HCN2Q9UL51 889 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 ACTL7AQ9Y615 435 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 ADAMTS20P59510 1910 aa13.38□□□□□ -0.27
SEC13-209ENST00000397117 ATXN2Q99700 1313 aaKnown RBP13.37□□□□□ -0.27
SEC13-209ENST00000397117 TCRBV21S2A2A0A5A6 115 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 TAF4O00268 1085 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 PPFIA2O75334 1257 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 TMCC1O94876 653 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 SERPINF2P08697 491 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
SEC13-209ENST00000397117 FAM193AP78312 1265 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 KDSRQ06136 332 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 CYTH1Q15438 398 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 HDXQ7Z353 690 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 PGBD3Q8N328 593 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC13-209ENST00000397117 ATP11CQ8NB49 1132 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 TSEN2Q8NCE0 465 aaKnown RBP13.37□□□□□ -0.27
SEC13-209ENST00000397117 SPATA22Q8NHS9 363 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 IMP4Q96G21 291 aaKnown RBP13.37□□□□□ -0.27
SEC13-209ENST00000397117 PWWP2AQ96N64 755 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 SAYSD1Q9NPB0 183 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 FSCN3Q9NQT6 498 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 DEC1Q9P2X7 70 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 SLC25A13Q9UJS0 675 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 FBXO10Q9UK96 956 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 INTS6Q9UL03 887 aaKnown RBP13.37□□□□□ -0.27
SEC13-209ENST00000397117 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 CHD5Q8TDI0 1954 aa13.37□□□□□ -0.27
SEC13-209ENST00000397117 NBEAQ8NFP9 2946 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 CXorf51AA0A1B0GTR3 108 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
SEC13-209ENST00000397117 TULP3O75386 442 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 TRIM16O95361 564 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 CFIP05156 583 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 GABRG2P18507 467 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 CES1P23141 567 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms